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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111281550, gi...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNQWFSKIA VWLVIAMVLF TVFKQFDTRA GASAGNIGYS EFLEEVRGGR IKNATIQEGQ  60
   61 GGTEIVATTN DDRKVRTTAT YLDRGLVGDL INNNVKFDVK PREEGSLLMT LLVSWGPMLL 120
  121 LIGVWVYFMR QMQGGGKGGA FSFGKSKARM LDENNNTVTF ADVAGCDEAK EEVKEVVDFL 180
  181 KDPQKFQKLG GRIPRGLLLV GPPGTGKTLL AKSIAGEAKV PFFSISGSDF VEMFVGVGAA 240
  241 RVRDMFENAK KNAPCIIFID EIDAVGRQRG AGLGGGNDER EQTLNQMLVE MDGFETNLGV 300
  301 IVVAATNRPD ILDAALLRPG RFDRQVYVTL PDIRGREQIL NVHMRKVPVG QDVNAAVIAR 360
  361 GTPGMSGADL ANLCNEAALM AARRNARTVE MQDFEKAKDK IIMGPERKSM VMPEEERRNT 420
  421 AYHEAGHALI GKLLPKCDPV HKVTIIPRGR ALGVTMSLPE KDRYSYDREY MLNQISMLFG 480
  481 GRIAEEVFMN QMTTGASNDF ERATSIARDM VTRYGMTEAL GPMVYAENEG EVFLGRSVTK 540
  541 TNNMSEQTME KVDGEVRRII DEQYALARKL IEDNQDKMHA MANALLEWET IDTEQLDDIM 600
  601 AGKPPRPPKD WTPRTPSSGG DNSSGGGTPA PVSSDPSPTV A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle