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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169597649, gi...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQHLSVNG QTRPGTVRHP TAPSMMMNSH FAGVGDNVDK EAYGHGIQVV DEDKVFNNNL  60
   61 STYLNIEKVI PAGFNYHLIS VFGSQSTGKS TLLNYLFGTQ FGVMAEQERR QTTKGIWMSK 120
  121 NKRPEGGSAM AENILVMDVE GTDGRERGED QDFERKSALF ALATSEVLIV NIWEHQVGLY 180
  181 QGANMGLLKT VFEVNLQLFI KDSKTIPKSL LFFVIRDHLG TTPLKNLQNT LTQDLSKLWS 240
  241 TISKPKGLEN SRIEEYFDFA FVALPHKILQ PEKFEEAVTK LSLRFKEGYN DPKTSGLVDE 300
  301 AELPIFQPQY HRRIPADGFP AYAEGIWDQI VHNKDLDLPT QQELLAQFRC DEISREVLVL 360
  361 FDETIAPLEE KQAEDTRMGK PSVIAELGAA MNAARSTVFK DFETNASRYH KGVYKRKQAE 420
  421 LEGKVDTRLK ALSQKQLNAA HKSGVESFSD AVSAAVKAGQ KKGASYDFAQ IVDSEKKKAI 480
  481 AQFGEQAKSI VIEGASWSSF EHELKVYRKD LDDVSGRLRK DEMRRLATRI ERWVRSRLDE 540
  541 SVGLEFNKLG TGRGGSGAPE HGERPPSEKD LWDRVWAIFT ETVSSAEKRF TDRAQSFDAS 600
  601 PEEVDVGLWR LRRKSWGVLR AKIDEEVMEG NILLKLRENF EDKFRYDEQG VPRIWRPTDD 660
  661 IEGIYTKARE STITVIPLLA RFKLSKTSAP PPLDAWIGDA PASVTPADEE DLTPIGGLDE 720
  721 EEGKSLEEEM TVLSDAKQAD LLIRFKKTAD GVYVEAKRSA IGGITQVPLY FYGLLVALGW 780
  781 NEIVAVLRNP VYFIFLILCA VGAYVTYTLN LWGPMIRMGN AASAQALEVG KERLREFLES 840
  841 SESGRQAMAM SGNQPRGESV RMNRLNGNGK KDEDAEVEDL DDI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle