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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111068042
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDTAAAAAA AASVSTARAD EPDSRNSLRH ILAAEPAMDD ARPSPSPGDT PAPDDSENAD  60
   61 APDGSKTAGD SDGARPYYTS TTTTTRRNAN GSVSSVYSGN KIKHLKKDDG IPLWRKDIQY 120
  121 DFLKLVFEDD KTVFTKQSDP QAGPMHTFAD IYLDAMAKSS KCSKILKDKL LTERPAAVNM 180
  181 AMVCLLVNVG RMNTTLNFFP EMRAQLRTYH SIPSLQAHQD PNAYKQLQDA PRLKSILKGA 240
  241 TEDQEQPSTV DEIMQAPIPR TNPVNLIFVL SQYAPKISEL HFFPPRDFFD LVMRSNLSSR 300
  301 SRATAFLWLM WWYLESDFTK DAAERNPFGP GQFGPADDPI TAENPLKCPP FDFLTPEQEA 360
  361 EENVDTPDEK VFGEIKRKER IAILASDMAP VVTGPKRTNK KNFNQNPVFS VLADDGASTP 420
  421 GRDRQSPSHG SARGRGNLAK SIIERDYPSD TDRTRSASPP GSVYNTGKKV TPNMRINTLL 480
  481 NDEVPASSPA PKGPGRGNWA RNRLTGGGGA GAGPGARSFK SRLDAGASQD GQSPSTSAPT 540
  541 FNGPHGFYLP LNGSDPSHKR TRPLTQHQLA VEQYRRRRVD VILDRGIRVE YKAAARRRRT 600
  601 TNTFMRAWIR CKGMADGYDT DEESHAQAQY QQDIEVGTKT PPPMPAGLVP MDFGGEVNDH 660
  661 GEESYYRAKM LSRALRRLER WEDGRVTMRA RPKGAVRNGI GDVGSRPVAD DEDDEDDDDM 720
  721 QDVDDLRREE ESESSEEEDM ERTYDAHTLP PLPRMH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle