YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111066772
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENVILDDSP LAEFLEGEGR GPSRPSSPTA STSPEIFSFA PRGPSTLQSR IRNRLPDPIR  60
   61 IHERHGSISR IHTACSKAVN SRLGRADNER FLEHFRYLVV ASQLLGGQEG LRTATIPSFA 120
  121 SPGGPGPQEF KVATISPTGA ALTGTTAFSL VWLVHWLRRQ PEISKGKWSL VFLLLVSVAT 180
  181 AVYGYTRRQW LQYLRQEAVE GASAVVTNLQ AFEASTSSAL ALIQEVELVS RGYRLSSPLP 240
  241 PISRIEEKGQ SRRCQRLRRS LRAAFADVVP IFVEQCGVLK QLILEDDLEK YLDVYDISNP 300
  301 DLQEAALGYS ETEFEDHETL KALRTLQYRL STLRRVYLCS LLALEADGGK PDFARWSTVV 360
  361 DSMQCLARPT GQWSENLNNI LSEEEQFIIP SPAHITPTPG KEKLRNSVRK LSGLSQGIRG 420
  421 LQAKMQVLRE ETNKSLEDTE DVHELGRHLM TQYESIGADI KSLVQAWEAG KTALVLNIDR 480
  481 QERRISHASS GLRSPVPSLG GLTAVDEGSP SDALRALNGD LLSPQQSAPS SDQGSNSDDE 540
  541 VFEAIAIPKT RATMSREERM QKIQEDRVRQ ASAREQRDAS TNMLRELESV INLRPYRSTG 600
  601 PGGRVTSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle