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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NGLY1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASATLGSSS SSASPAVAEL CQNTPETFLE ASKLLLTYAD NILRNPSDEK YRSIRIGNTA  60
   61 FSTRLLPVRG AVECLFEMGF EEGETHLIFP KKASVEQLQK IRDLIAVERR SRLDGSSQKV 120
  121 EFSQHPAAVR LPAEQPEDPT GLMQHSGNQP GQPLSLPSAP LVVGDSTIFK VLQSNIQHVQ 180
  181 LYENPVLQEK ALACIPVNEL KRKSQEKLFR ARKLDKGTKV SDEDFLLLEL LHWFKEEFFH 240
  241 WVNNVVCSRC GRETRSRDEA LPPNDDELKW GAKNVEDHYC DACQLSNRFP RYNNPEKLLE 300
  301 TRCGRCGEWA NCFTLCCRAL GFEARYVWDY TDHVWTEVYS PSQQRWLHCD ACEDVCDKPL 360
  361 LYEIGWGKKL SYIIAFSKDE VVDVTWRYSC KHEEVMSRRT KVKEELLRET INGLNKQRQL 420
  421 LLSESRRKEL LQRIIVELVE FISPKTPRPG ELGGRVSGSL AWRVARGETC LERKEILFIP 480
  481 SENEKISKQF HLRYDIVRDR YIRVSDNNAN ISGWENGVWK MESIFRKVEK DWNMVYLARK 540
  541 EGSSFAYISW KFECGSAGLK VDNVSIRTSS QSFETGSVRW KLRSEMAQVN LLGDRNLRSY 600
  601 DDFCGATEVT LEAELSRGDG DVAWQHTQLF RQSLNDHAEN GLEIIITFSD L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle