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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SEY1_COCIM
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSNGHFAYA EDDPVASYEH GVQVVDEDKE FNPNLSKYLA YEGVTPAGFN YHLISVFGSQ  60
   61 STGKSTLLNY LFGTHFSVMS ETERRQTTKG IWMSKNKRQD CERENSLPHL QNNRMADNIL 120
  121 VMDVEGTDGR ERGEDQDFER KSALFALATS EVLIVNIWEH QVGLYQGANM GLLKTVFEVN 180
  181 MQLFLKDKKS TPRSLLFFVI RDFLGTTPLQ NLQNTLMQDL QRIWTSLSKP PGLENSTIED 240
  241 YFDFEFAALP HKNFQTDKFV AEVKKLSMRF REGHRDPSKG NKTEGGIFLS EYHRRIPADG 300
  301 FAVYAEGIWD QIVNNKDLDL PTQQELLAQF RCDEISREVL VAFDEAVVPF ETKQAEAAQS 360
  361 GNPEVFAGLG PAMKNARVKT LSAFETEASR YHKRVFQMKR AELEDKMDTR LKVLFSGQLT 420
  421 AAHKSGIAQF SDAVSAAVKA GQKKGASYDF ADIVNKEKRI ALERFEDDAK ATVIEGACWS 480
  481 NYTQELALYQ KDLEKISAQL RKDEMRRLAT RVERWVRSRL GESVGLEFNA LGSGRGGSGA 540
  541 PETGDKPSED TIWDRIWSIF VATVLEAEQR FTERASSFDA SLEEVDVGLW RLRRKAWGVL 600
  601 RSKIDEEMME GNLLLKLREN FEDKFRYDSA GVPRIWRPTD DIEGLYTKAR ESTLTLIPLL 660
  661 SRFRLQETNA TPQLDRWVGY TPSAATPADE EDLVPIGGVD DDGKSLEEEM TMLSETKRQD 720
  721 LTVRFKKAAD GVYVEAKRSA IGGMTQIPVY FYILLLALGW NEIIAVLRNP VYFFMLFLCS 780
  781 VAAYIIYQLN LWGPMVKMAE AASHQAVEEG KKRLRDLLEP SDIGHHGMKY KNGTEQYEMS 840
  841 HVRSGRNATK INERDDDDEV EGEETW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle