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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119188845, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALAAEHIDP LKGDLKQEEV VQAAQDPQSN IPPETAERIL VEKSRKAGSV AYQFDPNATP  60
   61 EQKDEQVKMT IPTNFHRDKK PSPVAVTTDV INGTAVDGKT PTTGKTDGQL SPLPPKPSTE 120
  121 LSEEERWARD RTGWAPRFHI KEDEVDEGEI LLDHQTLLES KLDENLFGDW YHNAGIIVFA 180
  181 CLASWFIALI GGGLGWVFII MAACGTYYRT SIRRTRRNFR DDINRELAKN RLETDTESLE 240
  241 WINSFLVKFW PIYAPVIGDT IINSVDQVLS TATPSFLDSL RLKTFILGTK PPRLEHVKTY 300
  301 PKTEVDTVLM DWKFSFTPND TMDLTARQLR NKINPKVVLE VRIGKGVVSK GLDVIVEDFA 360
  361 FSGLMRVKFK LQIPFPHIER VDVSFMGEPE IDYVCKPLGG DLLGFDINII PGLESFIKDQ 420
  421 IHSNIAPMMY DPNVFPIEIA KMLAGNPVDQ AIGVVAVTLH GAHNLKNTDK FSGSPDPYAV 480
  481 VSINSRTPLA QTKTVHETTN PKWNETHYII ITSFTDSLTM QIYDFNEFRK DKELGTATFP 540
  541 MEGLETDTEH ENLSLDIMAN GRHRGTLQAD VRFFPVMHGG KNPETGVEEP PPELNTGIAK 600
  601 ITIEQAKDLD GTKSLVGQLN PYGVLLLNGK EIHITKKLKR TNNPIFTNPS KEVLITDRKA 660
  661 ARLGLIIKDD RDLVTDPILG TYQIKLNDML KMMEKGREWF NLNGAKTGRA KMKVEWKPVA 720
  721 LKGVVGSGGY VTPIGVMRIH LQNARNLRNV ETMGKSDPYV RVLLSGIEKA RTVTWRNNLN 780
  781 PDWDEVVYIP MHSPREKIIL EVLDEESIGK DRPLGMLELS AADYIREGED GQYEVDDEKQ 840
  841 LLSTPLRLEG RGNPKGTLNY TVAFYPTLNV ADPEEEEEEA KTKQAMDGQV AVETRKSIDS 900
  901 ARSGATGPPQ PNGEDKANGR PSADTTRSKQ LSNGEMEEAE TPTEKVVPKI RITSQDVHNY 960
  961 ESGLIVFKII EGQLSQQDVH LEVLMDDHAF PCYTSNKARS KHITFNDVGD AFVRELEFSK1020
 1021 ITLRLVEKSD SKGDDDHDGA IAKLSGPTLT TLQQCLYKPT ELTLRSSEGA VSKVTVSLKY1080
 1081 IPVKMTLDPS ESINNMGNLR VDVLDAADLP SADRNGFSDP YCKFKLNGRD VFKTKVQKKT1140
 1141 LHPAWNEWFE CSIPSRIAAD FKVDVYDWDF GEKSDFLGGA SIALDQLDPF RSQEVSIPLD1200
 1201 GKSGAIRLKL LFKSDYVVRS RQGSSTFSGT FAAPGKIVGA PVKTVGLIGG GVVKGASFLK1260
 1261 HGILRVRHGK EDSDASSATE IASPSNGAPV VPNVEVTPTP QKTPALVDSS PPPSTIASSQ1320
 1321 LHSRSRSTAS QVGERLGFGG SGVKGETGMA TFTVVSATGY PPSTNVRVTI KQSTAKGWKE1380
 1381 VHKSKAHKAG SGSAVNFDQA QETFRVKDVA ADVQFQIQVK DHATFGSDQV LGEGIFFVDD1440
 1441 QGSNAGKERS VKVGNGMVNI KTTFTPADNM SIRPGTSHST AGPMDEPDSP ESRKPRRSFL1500
 1501 SKRVISSSGS 

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