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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|228651885, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEQSNNQQK NKTKHMFPSL SENVNYIENK LCHSDDIKKL DVPFQNGKGT ILYIESLADP  60
   61 NLIHQLALEP LLTRSDLSLE KAFSTLNMKK ETNLNYGVQL LLQGKSLYFH EHVESFCIFE 120
  121 TALSLKRDIT EPDNEGVVRG PHSGFVEDLV TNLASVRKLI KSPNLVVKYF ILGEEMHTKI 180
  181 AIVYMQNIAN DDLVAEVKRR LEMIKTDALM PPGYIQEFIE DTSFSPFPQQ LNTERPDRTA 240
  241 ANLMEGRVAI LSDGDPTALI VPVTLFAFYQ SPDDYNNRWI VGSFVRMIRL VSFLIAFLLP 300
  301 AIYIATVAFH PDVLPLELVY TIKASLEKVP LPPIFEALLM ELIFELLREA GIRLPSRVGQ 360
  361 TIGIVGGLVI GDAIVKAGLV SYTMIIVVAL TAISSFLVPS NDMSSAVRIL RFPLMLLAAI 420
  421 FGYVGISFGL IITFVHLCQL HSFHTPYLSP VAPMRIKDMK DSFVRLPIWS FWERPHDPKP 480
  481 KKMQRQHVTR EDENGDKHAK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle