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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89203110, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFFLLLFLL LLARFFYIQA TGTVHNQDLR KLAQAKHNKT GVLEANRGTI YDQNGHVLAQ  60
   61 DANSYKLVAV LKGDNAVKNK EEAAKKIAGV LGKDEEKILT ILKKDKSQVE FGPLGKNLTK 120
  121 ETKEQIEALK IPGISFITEK ARVYPNGDFA SYILGYSRIN DQGTTVGAGG LEKSLDKFLR 180
  181 ASNGSVGYTG GHNGVPLEGG KQNIKPPKNG DNVYLTIDQR IQSFLENAMK AAAKHYEPEM 240
  241 LTAVVADPKT GKILAMSSSP SYDPNKPKIE NYLNIPVATT FEPGSTMKIF TLAAAINEGK 300
  301 YNGQEYYQSG TYPVGNRKIK DHNGGAGWGS ITFDEGVERS SNVAFAILGD KKLGPDLFRQ 360
  361 YIHKFGLDEK TGIDLPGEVE NKIVFDSQIQ QVTTAFGQGS TVTPIQLVQA ATAIANDGKM 420
  421 MKPYVIDRIV DPITGKVELQ HKPEEVGKPV SKETAAQVRQ LLERVVTSPK GTGNAYKIDG 480
  481 YSVGGKTGTA QIPDGKGGYM TGRENYIFSF LGMAPMDDPQ LVVYLAIKQP KLKDDEYGAK 540
  541 PLAEIFKSVT KDSLEYLKIK PKEVKDPKKY VKEQQVVVPD VTGKTMEEAK KILEKANFRP 600
  601 TILGEGKVKQ QVPKATEKTL KGDRIFLVGE QPKMPNIQGW ALRDVMNLAK TLNLNLKPSG 660
  661 TGYVTEQNVE EGALLQPGTE LAVTLIPPLE PQQEAEEPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle