YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|227071530, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKIAVLGA GSWGSVLANM LTENGHDVTL WSRNEEQVKQ LNTEHTNPRY MKDFVYSTNL  60
   61 TATTDMKKAV KGASVVLIVI PTKGLREVAK QLNAILTELH QKPLVIHATK GLEQNTYKRP 120
  121 SEMLSEDISP ENRQAIVVLS GPSHAEDVAI KDMTAVTAAC EDLASAKKAQ KLFSNSYFRV 180
  181 YTNDDVIGAE FGAALKNIIA IGAGAIQGLG YHDNARAALI TRGLAEIRRL GVAFGANPMT 240
  241 FIGLSGVGDL VVTATSKNSR NWRAGYQLGQ GKKLQDVIDN MGMVIEGVYT TKAAYELSRK 300
  301 RQVQMPITEA LYRVLYEGED IKTAISQLMD RDLTSENE

Type	Start	End	Confidence
Signal Peptide	1	18	0.91
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	338	0.95