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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PYC_BOVIN
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKFQTVRGS LRLLAIRRTS TATAASPNVR RLEYKPIKKV MVANRGEIAI RVFRACTELG  60
   61 IRTVAVYSEQ DTGQMHRQKA DEAYLIGRGL APVQAYLHIP DIIKVAKENN VDAVHPGYGF 120
  121 LSERADFAQA CQDAGVRFIG PSPEVVRKMG DKVEARAIAI AAGVPVVPGT DAPITSLHEA 180
  181 HEFSNTYGFP IIFKAAYGGG GRGMRVVHSY EELEENYTRA YSEALAAFGN GALFVEKFIE 240
  241 KPRHIEVQIL GDQYGNILHL YERDCSIQRR HQKVVEIAPA AHLDPQLRTR LTSDSVKLAK 300
  301 QVGYENAGTV EFLVDRHGKH YFIEVNSRLQ VEHTVTEEIT DVDLVHAQIH VAEGRSLPDL 360
  361 GLRQENIRIN GCAIQCRVTT EDPARSFQPD TGRIEVFRSG EGMGIRLDNA SAFQGAVISP 420
  421 HYDSLLVKVI AHGKDHPTAA TKMSRALAEF RVRGVKTNIP FLQNVLNNQQ FLAGTVDTQF 480
  481 IDENPELFQL RPAQNRAQKL LHYLGHVMVN GPTTPIPVKA SPSPTDPIVP VVPIGPPPTG 540
  541 FRDILLREGP EGFARAVRNH EGLLLMDTTF RDAHQSLLAT RVRTHDLKKI SPYVAHSFNK 600
  601 LFSIENWGGA TFDVAMRFLY ECPWRRLQEL RELVPNIPFQ MLLRGANAVG YTNYPDNVVF 660
  661 KFCEVAKENG MDIFRVFDSL NYLPNLLLGM EAAGSAGGVV EAAISYTGDV SDPSRTKYSL 720
  721 QYYMGLAEEL VRAGTHILCI KDMAGLLKPT ACTMLVSSLR DRFPDLPLHI HTHDTSGAGV 780
  781 AAMLACAHAG ADVVDVAADS MSGMTSQPSM GALVACTRGT PLDTGVPLER VFDYSEYWEG 840
  841 ARGLYAAFDC TATMKSGNSD VYENEIPGGQ YTNLHFQAHS MGLGSKFKEV KKAYVEANQM 900
  901 LGDLIKVTPS SKIVGDLAQF MVQNGLTRAE AEAQAEELSF PRSVVEFLQG YIGIPHGGFP 960
  961 EPLRSKVLKD LPRVEGRPGA SLPPLDLQAL EKELTERHGE EVTPEDVLSA AMYPDVFAHF1020
 1021 KDFTATFGPL DSLNTRLFLQ GPKIAEEFEV ELERGKTLHI KALAISDLNR AGQRQVFFEL1080
 1081 NGQLRSILVK DTQAMKEMHF HPKALKDVKG QIGAPMPGKV IDIKVAAGAK VTKGQPLCVL1140
 1141 SAMKMETVVT SPVEGTVRKV HVTKDMTLEG DDLILEIE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle