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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108877731, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNVGSIVIS TSSIEDLEHP NRVLRKPVST LSIPGSMKTP CAGNRETVSA ACTEEAGIAL  60
   61 VGVHSEYPRY MEERGLGGGV CKGPGSVQGG PGQKHKPNVG YRLGRRKALF EKRKRISDYA 120
  121 LVMGMFGIIV MVIENELSSA GVYTKASFYS TALKTLISVS TVILLGLIVA YHALEVQLFM 180
  181 IDNCADDWRI AMTWQRMSQI ALELLICAVH PIPGQYYFLW TTKLANKNKA MGSEYVPYDV 240
  241 ALSLPMFLRL YLICRVMLLH SKLFTDASSR SIGALNRINF NTRFVLKTLM TICPGTVLLV 300
  301 FMVSLWIIAS WTLRQCERFH DEEHANLLNS MWLTAITFLC VGYGDIVPNT YCGRGITLTC 360
  361 GMVGAGCTAL LVAVVSRKLE LTRAEKHVHN FMMDTQLTKR LKNAAANVLR ETWLIYKHTR 420
  421 LVKRVNPGRV RTHQRKFLLA IYALRKVKMD QRKLMDNANT ITDMAKTQNT VYEIVSDMST 480
  481 RQDSLEERIT SLEDKLQSIQ TQIENLPEVL TRCLTQHQER IDQRRNFLHP DAAVTGSSSG 540
  541 LPTPAPPLGS PLMLPHSSFS FRSVPSSSTP AYPWPASPIL PPISSRTPHL VPETLTPAPA 600
  601 TTASSTLSNS ITYPSGYQSA SNQSSTTGDT QTLTYRGTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle