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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157167277, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.28
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGPKQGGFG QTSAAGGFGS TFGSTTATAS PFGQTSTFGK PATTGAFGAT PAFGQQATPS  60
   61 LFGQTQPAAG GLFGASTTAA PAFGAPATTQ SGFGAFGQPQ QQTTSLFGTQ NNTAPSTSLF 120
  121 GTNNNNSAFG AAKPAGFGGF GQPAAQTSLF GQASTSQTTT GGFFGQTAQS GGLFGAQKPA 180
  181 FGGVAPIGAG NGTAVAKYQQ TASTDTLVKN GQTTTVQTKQ HCITFMKEYE NKSVEELRIE 240
  241 DYQANRKGPQ AGAAGGFFGA QPAPTPFGAQ ATQPQSLFGQ TTTSQPSTGL FGSTTNTFGQ 300
  301 TTAPAFGATQ ATAFGKSFGA TATTTSFGFG QTNTSTLGGL TANKPAFGTS TTGLFGQTAT 360
  361 PATNTFGQST FGGFGAQSQP QPAGGLFSGT TTSTAGGTAF GGLGTQTTQT GFGFGSTTAT 420
  421 NTTGGGLFGA KPASTFGAIQ SPFGQTPAST APTFGGFGTA TNTGGSLFGS TFNKQPAPAF 480
  481 GLNTATSTGT FGGGLNFGTG SGSLFGNTAN KPGGLGTGTG LFGNTSTLGA GTGGFGTLGG 540
  541 GGFGAGLGTN TGMGMAGQPT QAAVPIHQQI LAMVTSPYGD NPIFKDIKPL TGATAESLKP 600
  601 TNPTAQKAIL EGANQQFKVS PKVAGSGVRV KPVGAATLSK KSLFEGLEEY DSTLEESFSL 660
  661 KPNAKRLIIK PKVSTPTITI QNRAAPQQTS GNDSTAKDDP VAKESFHNQI PLNPIEVPSS 720
  721 AQDTSRRVSW LQSNALDKVR QSNRLSESVL DTTIKEFAPS SAAQSAASSS AAKDPNISLD 780
  781 SSSSPTGSTG SQPAGKPDTT GRVASSGSSP INMNDSLLSS SNRSFLNDTT ANATGMGDLS 840
  841 LMSNSIQEEA EPHPTGIVLR RPGYYTIPTL DEILQLMDAD GRCVVPNFTI GRKGYGNVYF 900
  901 NEPIDVANLN LDEIVHFRHK EVIIYPDDEN KPPVGQGLNR KAQITLDQVW PHDKALHEPI 960
  961 KDSHRLALMD YEGKLRRVCD KHDTRFLEYR PDTGSWVFKV EHFSKYGLSD SDEDEVPVDP1020
 1021 KKAKMTGEDK LGKEKGAIPK KPLMSREKVM GQEDLSFSMM THESLAPTSP TAALALGMGT1080
 1081 DSHKLQLMKA SFFVDDDFDR RSIISDMTDG GRDSPDQMVP NKPYFGLGRT LTSSLYMRGE1140
 1141 SPKVVEAESM QMDDFGAPPT LFTTSTSKNF QDQQKLKHGL ITEIPRPIGP KSLPLILKPK1200
 1201 VELVHSNNIV IPLHKSVLAR FLNNKSDLAY FHGRKFKVGW SFPSSLVQLN TVENCTTLKK1260
 1261 DEVMPIGDLH RFFAGRTGKD FSPAALQMLR IRSSAEIPEF AKTVEDHLRI QLKYDDVRKV1320
 1321 PGSDCPHYVA GGKHAALADH LEMARLIATG GDFESLCVEV WSLCAALWGA REELEDVEET1380
 1381 AHMSIMFRRD LFSEWIEEVV TDLSAKEVTA ALKGKKQEYL DQLLELICTH KVLDACELAF1440
 1441 ENNDINLSML LAQISGGPTV RQLVQHQLSS WQDVEADKFI DPRRLKMFML IAGIPLLSST1500
 1501 HGAINIFEKL GWLKSLALHL WYLCSPTASI TDALINYEKS FESSEFFALP PSPAYTSRVK1560
 1561 LDSSKPIQDI RFHLLKLYSK RSHPLESLLN PATHTPDPLD FRLSWFLLQI LETLGYRHCS1620
 1621 ELSRSQLHVS FASQLENHGL WHWSIYVLLH LNDQSRRELA IQDLLYRYIQ LTSATLGDDE1680
 1681 QDEEYLQRER FVVNELGIPE SWIFWAKAVR AGAQFDYHQQ ARFLLKAKQW SQAHEVIMEH1740
 1741 IAADCVINDD IPYLKSLLND FEDVKQISNW SIKGQILKDF IELNEKFDLI RDAIDDEVAE1800
 1801 ARLEELKPKL SDLCSVIKMF PCPTPKHRLC QSEIAQRLAY LIRSFFAQDP RINSCALMRS1860
 1861 ALEKLPLPQE YAKEELRHML SAFLVEDLRK QQ

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