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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148569693, gi...
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDTGVALTS EREKRIDALL QQMTLAEKVA LLAGSSMWTT TPIERLGIPA IKVTDGPNGA  60
   61 RGAGGFVGGA VTAACFPVGI ALAATWNTTL LEAVGEALAE EAQSKGAHLL LAPTVNIHRS 120
  121 PLNGRNFECY SEDPYLSARM AVAYITGLQR RGVGATVKHY VCNDSEFERN TISSEVDERT 180
  181 LREIYLPPFR AAVQEAGTWA VMAAYNRVNG IYASEHPMLL IDILKREWEF DGIVMSDWFG 240
  241 TKSVVEAAAN GLDLEMPGPT RWRGERLLAA VEQGQVSLAA IDESARRMLR TIARAGAFEN 300
  301 PDIRPEQAID RPAHRALIRR AAAEGMVLLK NEGGILPLNL ASLSSIAIIG PNAKTAQIMG 360
  361 GGSAQVNAHY AISPYDGIAA RVGNRATLGY EIGCTNHRQL PRLDGKLVEA GDGSGRGFTI 420
  421 VYYNSPDLTG DPVHRATVET GEQVWLGEVA PGVDPRQFSA RLTARFTPTE SGVHTFSLIS 480
  481 AGVSRLFVND TLLVDNWTNP VRGDTYFGAG STEVTASIAL EAGRTCDLRL EYSTQGAAML 540
  541 AAVRLGYLPP VAEDAIERAA ALAARSDVAL VFVGLNADWE SEGHDRPHMD LVGRQAELIE 600
  601 RVANANPRTV VVLQTGSPVT MPWLDKVAGV IQAWYPGQEC GNAIADVLFG DVNPSGRLPQ 660
  661 TFPVRLEDNP AYINYPGENG RVRYGEGIFV GYRYYEKKKV APLFPFGFGL SYTTFRYDNL 720
  721 RLSADTLAPD ERLTVQVDVT NTGNVAGQEV VQLYVRDSAA RVARPEKELK GFAKVALQPG 780
  781 ETQTVTLHLD REALAYWDDA QHAWVAEAGE FEVLIGSSSQ DIRARATFRL SETVSFGGPA 840
  841 KPPVKLSIDS PVKALLEHEG ARHILERYLP GFAEQAGVGV MMGLTLAQMA GFAPDRITPE 900
  901 HLAAIAADLA QLRDQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle