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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SEY1_ASPTN
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNGHFASL GGDSSDKTAY EHGVQVIDEN KEFNPNLSKY LSIEDVTPAG FNYHLISVFG  60
   61 SQSTGKSTLL NHLFGTRFSV MSELERRQTT KGIWMSKNKN TEGSMASNIL VMDVEGTDGR 120
  121 ERGEDQDFER KSALFALATS EVLIVNIWEH QVGLYQGANM GLLKTVFEVN LQLFLKDKNT 180
  181 THRSLLFFVI RDFVGMTPLK NLQKTLMEDM SRLWDSISKP AGLEKSTVHD YFDFQFYGLP 240
  241 HKGYQPEQFV AETKKLSLRF REGHKDPSLD AQKGEFSDGG VFLPEYHRRI PADGFSRYAE 300
  301 GIWDQIVNNK DLDLPTQQEL LAQFRCDEIL REVMVAFDEA IVPFEDKQSQ AARLGEPEIL 360
  361 GGLGAAMRTA RAKAVKSFET EASRYHKGVY QRKRAELESK IDTRLKALFQ GQLNATHKSG 420
  421 INEFSDAVTT AVKSGQKKGT GYDFAEIVSE EVKKAMEKFE EVARTTTVEG TSWSDYSQEL 480
  481 ALYEKELAEV SARLRRDEMR RLATRVERWV QSRLGESVGL EFNALGSGRA GGGAPETGDK 540
  541 PTEKKFWDRV WNVFVETVLD AERRFTDRAS SFDASLEEVD VGLWRLRRKS WGVLRAKIDE 600
  601 EMIEGNLLLK LRENFEDKFR YDDAGVPRIW RPTDDIEGVY TRARESTLTL IPLLSKFKLS 660
  661 ETSAPPPLDR WVGHTPSSAT AADEEDLPPI GGVDEEEGKS LEEEMTILSD SKRQELIVRF 720
  721 KKAADGVYVE AKRSAIGGMT QVPLYFYGIL LALGWNEIIA VLRNPAYFFL LFVCAVAAYV 780
  781 TYQLNLWGPI LKMTEAASNQ ALAEGKKRLR EFLESSDTGR QAIAMSASGS EQHEMSRLNK 840
  841 QGKAAASDED GDDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle