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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114196581, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDDAIPPHG DNDSHRPLTP NTAIHCPPPP SSSPPTSSLP SADRPADIPL TQAVLRLIQC  60
   61 SQCSRPLQTP LRLPCGNTVC RGCLPPLHRR RGVTYPATEA RRDGFTCSAC LGDHCVGDCG 120
  121 TDVLLTRLVE VFDEVLRPAA TEAEENATGE EGGMEGLYAL IREGRFDYNG YGGACERDGG 180
  181 QTDARSATVL GRLAERLRGE LDCHVCYALI LDPLTTCCGH TFCQRCVAMV LGHSDLCPVC 240
  241 RRKLNMSSTL QSEPVNQRIA ALIEALFPEQ VAARRETSAL EESNPNETTL PLFVSSLSLP 300
  301 TMPTFLHIFE PRYRLMIRRV MQSRGRRFGM VMYNRAGRLQ EGLGRSQFLQ YGTVLVVDRY 360
  361 ELLPDGRSLV VATGVSRFKV LGSVVVDGYQ VGRIQRVDDI SITEEEAREA LETSATAVDV 420
  421 EGSAERPLES MSTQELFQLG LDFVRRQHGQ GAVWLRPRAL LAYGDIPTDP ARFPWWFASI 480
  481 LPVWEEEKYA LLSATSVRER LKITARWIRK LESPVPVLVF AVLSMSLGAG TMSLPLGSSV 540
  541 FTTFTPFSMS VSVSFGSAGP FTVNSGQPHF QREGSETHLP QIVVAEWSRR TLPDWPDGFD 600
  601 ADHTEDNAIL QRET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle