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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115388545, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLVYENSP LADYLQGAGE HDPNWPVQET DHNDDASDST AADFAPRGAS KFRERIRSKL  60
   61 PKPLDLKSSR HRALLLRLYD ACMDALNARV GRSDNERFLE QFGYVIVASQ LLNEHNAPSY 120
  121 TSAADILANS HPVDLPSIST TFGLQGAVVT ASTSFSIAWL LHWSRSRTGS GLNPRKVGVL 180
  181 LVLVPVIGVL FYAFAKRQWL KYLRHQAVEA AVSFIGNAQG FDSAASASVV FIQEVELVSR 240
  241 GYRISTPLPP ISRLEDQAQT RRCLRLRRTV SECFYSMLGR YIRAQHILQP LTNHADLAKY 300
  301 YDIYDIAEAD LAEVESAFAQ RATEDQYSLR ALRTLFGRLY IVRKSVLCCL LALGADGGGS 360
  361 DISRWSVALE QMRDMAFVTG ENTQKMTSIL NEEDRDVIPP SPLPTASPNR ENLRSQYRKL 420
  421 NSLSQGIRAL HAKMHVIKEL SSADVERTDS GDLEATLLSQ YESIGADIKG LLDEWEAGKS 480
  481 ALTNSFERQT AMDRLSRPPS GMKSPLSPTP SLGGATAVEG SPADALKALN GERPDSSIFQ 540
  541 SLEEDEEIFE AVAPPSRNKR SSLTREERIA RVREDRAKQA AARDRLDANT NMLKELEMVI 600
  601 KQRPKTTASK RVTSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle