YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLPL_ASPTN
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDSAIGNVY DPRALPDYDR EFIHPDDLRR FENALNDQDV LPLVALNDWR PVYQRVRKTR  60
   61 GRRKEPRRTK DETREGVLYT VLKWPFLAFV LGWISFLGVA YILTRFYIFI YEQWVSWRGK 120
  121 RQSLRKQLYV QTNYRDWLKA AEALDAHLGN HAWKEIDENA YYDHITINKL VSQLRKLRQD 180
  181 AEWEMHHEQV NAAESPAVEE LCTILEACVK NNFAGVENPR LYSETYSGTK VLVQEYVDEV 240
  241 KACLELVAES KQISDEDKYH HFKHLDTNFG RTALCLSGGA TFAYYHFGVV RALLDNNVLP 300
  301 EIITGTSGGA LVAALVATRT DEELKQLLVP ALAHRIRACH EGFTTWVRRW WRTGARFDTL 360
  361 EWARQCSWFC RGSTTFREAY ERTGRILNVS CVPSDPHSPT ILANYLTSPN CVIWSAVLAS 420
  421 AAVPGILNPV VLMTKKRDGT LAPYSFGHKW KDGSLRTDIP IKALNLHFNV NFTIVSQVNP 480
  481 HINLFFFSSR GAVGRPVTHR KGRGWRGGFL GSAIEQYIKL DMNKWLRVLR HLELLPRPMG 540
  541 QDWSEIWLQK FSGTVTIWPK TVPSDFYYIL SDPTPERLAR MIHMGQQSAF PKIQFIKNRL 600
  601 KIEYAIIKGL QQTAPRGGGR ATSPTQLRLR NGHGNGPVNP IDERLDQNLP ERTGEYSKEA 660
  661 DANSAEMSDS SGVDSATASA LREARHPRRN SMLVEMQRQS AVFFDDVDSD TWKGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle