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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115399938, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRRSSGSPV EDDAEDPLIS RTPSEPSGPN AVEPSERARP QVARTGTSFD LRRDHTGAST  60
   61 PRSRNSSTWR MPSSATTTLL PPDPRSSSAA MPLTSQRLLA EASPDAQSRS RPARLRSPWP 120
  121 CSILTALTSL LASLFLCAIL RSFAARQTGG DGCGIPVMSP AFLHMAGFDT EHTRFASKYN 180
  181 LYLYREQGVD PFNHENLGLN GAPVLFLPGN AGSYRQVRSL AAEASRHYFE VVRHDQERLR 240
  241 SGTRSLDFFM IDFNEDMAAF HGQTLLDQAE YVNEAVAYIL SLYHDPKRSR RDPELPDPSS 300
  301 VIIIGHSMGG IVARTTLTMS NYQANSVNTI ITMSAPHAKP PVSFESDVVH TYKQINDYWR 360
  361 EAYSQTWANN NPLWHVTLIS IAGGSRDTVV PSDYASISSL VPETHGFTVF TSTIPDVWIG 420
  421 MDHLSITWCD QFRKAIIKSL FEIVDVRRAS QTKPRAERMR VFKKWYLTGL EPIAERTLSQ 480
  481 KEPNTLLTLE DQSNTILPQG QRLILRELGH RRSPNVHLLP VPPQGVAGKK FTLLTNQRFD 540
  541 KSGEQGTLEV LFCSVFPLQN GKFSTVFTMN MDFSGGNVGS TRLACKNAAE DAIHLPASTH 600
  601 FSKHPYDRAE PFSYLQYDLE DLAEHQFVAV VDKAQSPTKG WLLAEFSDSS DAVIRARLGL 660
  661 GGLLSAGLKM RLPANRPMLT EVKIPALYSS LLDYNLKIVR RNHGNQQELF TPLLRQSIPD 720
  721 PHESKFFVNV KDVNVNLHGV APFMPPPLRE QAAVGGVSFQ LWTDPSCDST VDISLHVDIA 780
  781 SSLGELVMRY RTVFAAFPIL VVALVLRKQF QVYDQTGYFI TFTEGLDSAL RSSLPMLLLA 840
  841 MSLLASSLAT SSRLPPSDDP FHWPLNSTES PIDFTKNDLL LGSQDAFFWF LVPLFGLICV 900
  901 GVCVILNYIA LALLSVLAFF YGIFKSKSGY IKRDDKRLVP GFHSTSVTVT NEASNLPIFS 960
  961 APTPRKRMIN TAILLLLVST TIPYQFAYLV ACIVHLATCV RAQWHAKETK STTHYNFFNY1020
 1021 THSIFILMLW ILPINILVLL VWAHNLVVHW FMPFSSHHNV LSIMPFILLV EAMTTGTMIP1080
 1081 RVTTRTSPPS SSSPLPSTRP STASRTRISS TT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle