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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115402325, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVESEAYHG ESITPAVQQP QSSSQESVTY EKPRDVGVDT PIPRVTLRAF IMGLFVSMGG  60
   61 LLFGYDTGQI SGFQEMSDYL QRYGELQPDG SYSLSKVRSG LIVSLLSVGT LIGALAGAPV 120
  121 ADKLGRKWSI TVWCMVMVVG LIVQITSPSG HWYQMVVGRW VTGLGVGGCS LLVPMYQGES 180
  181 APRHIRGAMI SCYQLFVTLG IFLSYCINLG TESLDGTAQW RITLGLTFLF ALVLGGGMAV 240
  241 FPESPRFEYR HGRVDSARRT MSKLYGVPEN HRVIIQEIEE IQQQLDAESQ EQVWHEFITA 300
  301 PRMFYRIVLG MVLQSLQQLT GANYFFYYGT TIFQGAGISN SFITQVILGA INFGTTFGGL 360
  361 YVVENFGRRK SLIFGAGFMF VCFMIFASIG HFLLDVQNPE NTPGPGKGMI VVACFFITAY 420
  421 AMTWGPMIWA IAAELFPSKY RAKGMALATA SNWLWNFLIG FFTPFITGDI DFAYGYVFAG 480
  481 CLFAAALVVY FCVIEGKGRT LEELDWMYVN KVKPWESSKF QMPDLHREER REARKESQSY 540
  541 HAENASNTRT PSASQLSKMH TFLDRPLLNG KDADKWKKPA DPEEVSSNLE KWYQAGRLLF 600
  601 PRESLQSIHD QITKPPKNGE LITVKGFDDV VYEYRVQTGN RRWSWLPDYS RQDEEGWLEP 660
  661 ENCERVQYTF SIERLHNQLE WGVSRAYSSL SIGHWMSRED KPDPPGDFAA SLDLFRTSYA 720
  721 AWEDSAAWAE IRATLRSLRL PCRITKVIGI ANGTFAITPS DPEGYARSAV QHAFLLTVKK 780
  781 ALQADGMAED EVACYVQDPA YTAADRAVLR EYEMQVVEDP EGFLLMDAAT VVFSCAPNIC 840
  841 VKEIVADIVR PAVLVWCRVK EDDYASTDPN SPRVREMIEK EYDEFPFPED GNFTAMRIYT 900
  901 IKGGSIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle