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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|160860495, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNTKTVLAL AISSVCGLAH GADNLIISEY VEGSSNNKAI ELYNPTAGVI DLSQYQLRFY  60
   61 FNGSTNVGTT IALTGSLAAD ATYVVADNDA SADILAVTNQ QSSASFFNGD DAIELTYQNQ 120
  121 VIDSLGQVGV DPGAEWGSGD LSTQDNTLRR NPDQLIADPI SDDAVSFSTW LGFAKDDISD 180
  181 LGKFSAGTPT DPVDPPPSSL VCGEEATAIH ALQGAGAASP LNGQTLVVEA VVVSNQEAGL 240
  241 KGIFVQMPDN EADSDPQTSE GVFVYTGTAP TAYVAGDRIR LKAKVTEYQG LTELTTLSEH 300
  301 TLCATAQALP TAAVVTLPVN SSDDFEPFEG MRVRFSQDLV VNEVYNLGRY GEISLGSQRH 360
  361 FIGTQVAAPG ADALAVSAAN QRDSILLDDG LTAQNPDPVQ FPAPGLSASN TVRVGDKATS 420
  421 LTGVMHYGFN LYRIMPIETV NFIAENPRPI APTLVEGGNL KVASFNVLNY FNGDGQGAGF 480
  481 PTARGANTLS EFERQKAKIV SAMVGISADV FGLMEIENDG FGANSAIADL VAGLNAAVGE 540
  541 ARYAYIAPTG MNAIGTDAIT VGLIYRSDKV TPQGAARILS SANSPLDSDQ KPLFDDSKNR 600
  601 PMLTQAFSVN GSEEGVVVAV NHLKSKGSEC AGDPDLNDGQ GNCNITRTRA ATAAGQWISE 660
  661 QYPDQGVLLI GDLNAYAKED PLTALGNAGF SELFAKLEKP NPYSYVFSAE SGQLDHALAN 720
  721 AALLDKVVDV TEWHINTDEP RVLDYNEEFK TPAQIQDLFA TDAYRSSDHD PVVISLLLEA 780
  781 EKVAPVASFT QVVNGAAVQL TSTSTDSDGQ IVSAEWSFGD NTVAVGEVVT HSYSQSGEYL 840
  841 VTLTVTDNDG LTHSTSQTVT VVVGEVKQPP VAQIQRINLL FVDMFISTSY DTDGVIKQHK 900
  901 WTFDNGTRAN GQVVLRLARR GQHTVELTVK DNDKLTGTTT LTYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle