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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71361667
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCVKKSSSSL GGGVSPNTSS LPQGSWGGSG LLSSSGSLGA ERWWPPGSAG KNQLREPMPW  60
   61 GDPVQAAARM EETSSGVGAT GDGLPPQFSS PTAWQGLHEG PTSGRGLRLG PGSRSRGTRL 120
  121 AHRGNARAGA VLRNLRRHGR SLSLPFNPGA NRKPAAWPSD GQASGPMNTA DGEPSVNQNR 180
  181 KKKNPRTAPA VSAAASRILS RRRRLRFSPC TGDLASAQLG GAPNRWEVLS ATPTTIKDEA 240
  241 GNLVQIPGAA TSSGQYVLPL QNLQNQQIFS VAPGSDSSNG TVSNVQYQVI PQIQSTDAQQ 300
  301 VQIGFTGSSD NGGINQESSQ IQIIPGSNQT LLASGTPPAN IQNLIPQTGQ VQVQGVAIGG 360
  361 SSFPGQTQVV ANVPLGLPGN ITFVPINSVD LDSLGLSGSS QTMTAGINAD GHLINTGQAM 420
  421 DSSDNSERTG ERVSPDVNET NADTDLFVPT SSSSQLPVTI DSTGILQQNT NSLTTTSGQV 480
  481 HSSDLQGNYI QSPVSEETQA QNIQVSTAQP VVQHLQLQDS QQPTSQAQIV QGITPQTIHG 540
  541 VQASGQNISQ QALQNLQLQL NPGTFLIQAQ TVTPSGQITW QTFQVQGVQN LQNLQIQNTA 600
  601 AQQITLTPVQ TLTLGQVAAG GALTSTPVSL STGQLPNLQT VTVNSIDSTG IQLHPGENAD 660
  661 SPAAPEFTYL ILGSRKKSLI GRVQLSGDST LNTNDLTHLR VQVVDEEGDQ QHQEGKRLRR 720
  721 VACTCPNCKE GGGRGTNLGK KKQHICHIPG CGKVYGKTSH LRAHLRWHSG ERPFICNWMF 780
  781 CGEKKFVCPE CSKRFMRSDH LAKHIKTHQN KKVIHSSSTV LASVEAGRDD ALITAGGTTL 840
  841 ILANIQQGSV SGIGTVNASA TSNQDILTNT EIPLQLVTVS GNETME

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle