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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66947665
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEPELLGYK PAATEGNGQV PSTGANGIPD PDKVLFKNGR VSPTSSQKDD KKKKKKKDGK  60
   61 DGEEEKEPEK MVGFFEVFKY STCVDKLLMI FGSLFALAHG AALPAMIIVF GDMTDLFVDS 120
  121 GTFDQLVAKL TNYLPILGLT KEQVYDNPYV LNNNRTGIED YLNTNVTWTL NINDTWSLLE 180
  181 TQDKLLDQMR TFAIYYIIIA CGVMLCGYVQ VSFWATAAEK QAHRIRDKFL KNVLRQEIGW 240
  241 FDTHETGELN NRLSDDINKI HEGIGDKMGS CLQWTSGFLT GFIIGFIYGW ELTLVILAIS 300
  301 PLLAAVGFVM NKLVADMSSK ELEAYAKAGS VAEEVFSSVR TVVAFGGQKK ECDRYNSHLV 360
  361 EASAVGIKKG FTNGFSVGLV YVVMFGAYAL GFWYGAKLVR EQSDNYTIGN VLIVFFSVLI 420
  421 GAFSIGNIAP PLQSLAAARG AAYTVFEIIN LVPEIDSSSE EGMRPDHVTG SIQFRNIKFR 480
  481 YPARKEVEVL KGVDLTVKPG QTVALVGSSG CGKSTCVQLL MRFYDPEGGM ITLDGNDLKK 540
  541 LNVKWLREHI GIVSQEPVLF AMSIKDNIRM GRDNVTDDEM IAAAKMANAY NFIMELPNKF 600
  601 DTLVGERGAQ LSGGQKQRVA IARALVRDPK ILLLDEATSA LDTESEAVVQ EALDKARAGR 660
  661 TTIIIAHRLS TIKTADIIAG FKEGVIMEQG THDELMAKGG IYNTLVTLQT KKVDEEVKAE 720
  721 EEELIKEYTE GKTGKTEHHT PHHKHELKRM MSTLSDGKPA LEKQESVKDA KKKKKGKKGK 780
  781 DGEDEDKPAD VGFGRIIKYN APEWPLILIA CIAACPNGGI QPAFAVIFSE LIGVFAEQDE 840
  841 EKQKDDVILY CLLLVGIGVA GFFTFLIQGA LFGKSGEALT MRIRKNTFRA MLRQLVADMS 900
  901 SKELEAYAKA GSVAEEVFSS VRTVVAFGGQ KKECDRYNSH LVEASAVGIK KGIYQWIFGW 960
  961 AGLCCYVWCP MPLGXWYGAK LVREQNDNYT IGNVLIVFFS VLIGAFSIGN IAPPLQSLAA1020
 1021 ARGAAYTVFE IINLVPEIDS SSEEGMRPDR VTGNIQFRNI KFRYPARKEV EVLKGVDLTV1080
 1081 KPGQTVALVG SS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle