YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ANO10_DANRE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	209	0.98
Transmembrane Helix	210	234	0.85
Non-Cytoplasmic	235	242	0.85
Transmembrane Helix	243	261	0.92
Cytoplasmic	262	313	0.96
Transmembrane Helix	314	335	0.93
Non-Cytoplasmic	336	353	0.91
Transmembrane Helix	354	377	0.85
Cytoplasmic	378	399	0.93
Transmembrane Helix	400	422	0.89
Non-Cytoplasmic	423	432	0.84
Transmembrane Helix	433	455	0.80
Cytoplasmic	456	502	0.86
Transmembrane Helix	503	524	0.64
Non-Cytoplasmic	525	553	0.57
Transmembrane Helix	554	577	0.79
Cytoplasmic	578	590	0.50
Transmembrane Helix	591	613	0.69
Non-Cytoplasmic	614	646	0.46

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLGLSVSDS DASPFTPLAV LELAHDTKAE AIAWLLNRIR DKQRNGGAEL LVDQLLFPAQ  60
   61 DGQKPNPNVF VVGSTLQRLL SGAEDVGLFK EFQDGTMRGF TYANRESFKD FEGDGEGFLG 120
  121 DAECQYIVKH ELDTLRAKNE EYIPGYPKYK LYPGKSIVRR LQSKGVLVQY FPLHNKEDLK 180
  181 RLSFSWYKKI KLSFQPLDDI RSYFGEGLGL YFGFLEYFTF ALIPMALIGI PYYLFDWEDY 240
  241 DKYVLFAVFN LVWSTVFLEV WKRCSATLAY SWGTLGRKKA FEEPRAGFHG PLGLNPVTGR 300
  301 EEPIYPSSKR HLRIYLVSVP FVLLCLYLSF YVMMVYFDME FWAISIYHEN PNFATSVLLF 360
  361 VPSIIYAVVI EIMNLLYRYA AEFLTDWENH RLESSFQNHL VPKVLVFNFV NCFASLFYIA 420
  421 FVMQDMVLLR QSLATLLITS QILNQVMEAF LPYWLQRRRN KRVYKRMRRL MGDKELPLLE 480
  481 QIQLETEMNT YLGTFDDYLE QFLLFGYVSL FSCVHPLAAV LVVLNNITEV YSDAFKMCHV 540
  541 FKRPFSEPAA NIGVWQLAFE TMSIIAVVTN CALIALSPQV KAYFPESDAQ LILTVVAIEH 600
  601 VLLAFKFILA FVIPDVPKHI QVKLSKLDFE SLEALKKRKI LEVAET