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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47681491, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTSLIFLIL SLASGALSQS RTRFARYRSW NSQMYPVWRD GDPRYRDCWK GGEVTIEVRS  60
   61 DSPTLTGAKA SFNIDVRFPQ NQTVLPDGQV VWARNCTVNG TSYTMGQSVY PESSIPQDWS 120
  121 GVFPDRTPFN RTSNKKPRFI YVWKTWGKYW QVADGPSSLL SIDTNSVPLG SYSMEVVIYH 180
  181 CRGKDKFIPL GYVSTQFSIT DQIPFAVTLS QVGDINQGDQ NFIQNRAVAF SINLHDPSSY 240
  241 LSSSDITFNW DFGDNSGTLI SRETTVTHTY LTPGSFRPQV ILMAAISTGC PVNPTPAVTV 300
  301 DPPAPVTDEG TALDTIVVAV SPQPVDVIPN AEEGVAADAT VVANDLAVAE TDPVDPADTV 360
  361 DTTDAVAEAD NTAVVEGTVA TEAELAAEAE NTATDALATP AVIEAEDEAE NTATDALATP 420
  421 AVIEAEAAAE AENTATDALA TPAVIEAEAA AEAENTATDA LATPAVIEAE AAAEAENTAT 480
  481 DALATPAVIE AEPAAEAENT ATDALATPAV IEAEPAAEAE NTATDALATP AVTEAEPAVE 540
  541 APAAEIDLAA TVLPEAAAAA VDTTSVQTAL EPVAPTGDAV VANVAEDTVI EAAAEADDAA 600
  601 NAITGVTSIP EAAVTELEAE LVAGTEATQA ALIIAKRQAP EMPAEASCMV YRYGSFSTTL 660
  661 TVVQGIESVE IVEVNNVVML ATELEQNAVD LTVTCQGSLP NQVCTVVSDA DCISPVQTQC 720
  721 NDVTPTPECQ IVLRQFFNNS GTFCINVSLT NDVSLAVTSA RLNVAIDTNS SRNTAGATLG 780
  781 VLFFVCALAA IAFTYKRFKE YHPLREESEG SGFASGISAV PSMLWSFLNR RSTAESRPLL 840
  841 LGRVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle