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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PAPS3_ARATH
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKGGGRNKG FPQDDESSIS LRQLMVNEGL IPSLEDEVKR RGVINQLRKI VVRWVKNVAW  60
   61 QHRLPQNQID ATNATILPYG SYGLGVYGSE SDIDALCIGP FFASIAEDFF ISLRDMLKSR 120
  121 REVSELHCVK DAKVPLIRFK FDGILVDLPY AQLRVLSIPN NVDVLNPFFL RDIDETSWKI 180
  181 LSGVRANKCI LQLVPSLELF QSLLRCVKLW AKRRGVYGNL NGFLGGVHMA ILAAFVCGYQ 240
  241 PNATLSSLLA NFFYTFAHWQ WPTPVVLLED TYPSTGAPPG LMPIQLPCGS HQYCNSTITR 300
  301 STFYKIVAEF LLGHNLTKDY LKLNFSWKDL FELYPYANTY TWFTKIHLSA ANQEDLSDWV 360
  361 GWVKSRFRCL LIKIEEVYGI CDPNPTEYVE TYTKQPNIVF YWGLQLRTIN VSDIESVKID 420
  421 FLKNVNSGSF RGTVGRIQLT LVKASQLPKN GECGSNNRSK KVTKTCWRIR EDKQCNNVPV 480
  481 YSKHLPGYVV GYQKMVNREA DGMEVKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle