YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70887587, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRWSTLIGR VIMLAPVRTV STESRRCPML TVQPCRGMVD EKFQVIIKNL LPNQEVTLHS  60
   61 LHQSEDKDFW EAFGHYISDE HGTVTVAKDE SLGGTYEGTE QMGLLWSLRP VPGSRSALRL 120
  121 RKMNVLTPMV VNISVYNGHL SQGFSQTSAL ATTVTERWYM APGVQRVDIR ENGVRGTLFL 180
  181 PPGPGPYPGV LDLWGGGGGL IEYRSALLAS HGFACMALEY ISPGELKKTD VDNTYFEKAY 240
  241 QILQNHPLVQ KDKMAMLGLC FGSVITFSMT VYSSVIKPQC CVCISGSHVV PVNKCMFEVF 300
  301 EDIKKLMGKV QENEDKHIVT REIILPIPSD PALKADVGRI KCPLLLVNGT DDQNWATNES 360
  361 AEDIKMMMEK AGNRHLLTVL TYPDAGHLIE PPYTPHFRAT NFLLHDMKVK VVMLWGGQTK 420
  421 PHAYAQEDSW KKILAFFHEH LYGSNVKAKL

Type	Start	End	Confidence
Signal Peptide	1	22	0.76
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	450	0.96