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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62148926
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHLKRLVKL HIKRHYHRKF WKLGAVIFFF LVVLILMQRE VSVQYSKEES KMERNLKNKN  60
   61 KMFDFMLEAV NNIKDAMPKM QIGAPIKQNI DVPERPCLQG YYTAAELKPV LDRPPQDSNA 120
  121 PGASGKPFKI THLSPEEQKE KERGETKHCF NAFASDRISL HRDLGPDTRP PECIEQKFNG 180
  181 CPPLPTTSVI IVFHNEAWST LLRTVHSVLY SSPAILPKEI ILVDDASVDD YLHEKLEEYI 240
  241 KQFSIVKIVR QQERKGLITA RLLGAAVATA ETLTFLDAHC ECFYGWLEPL LARIAENYTA 300
  301 VVSPDIASID LNTFEFNKPS PYGSNHNRGN FDWSLSFGWE SLPDHEKQRR KDETYPIKTP 360
  361 TFAGGLFSIS RDYFEHIGSY DEEMEIWGGE NIEMSFRVWQ CGGQLEIMPC SVVGHVFRNK 420
  421 SPHTFPKGTQ VIARNQVRLA EVWMDEYKEI FYRRNTDAAK IVKQKSFGDL SKRFEIKKRL 480
  481 QCKNFTWYLN TIYPEVYVPD LNPVISGYIK SVGQPLCLDV GENNQGDKPL ILYTCHGLGG 540
  541 NQYFEYSAQR EIRHNIQKEL CLHATQGVVQ LKACVYKGRR TIAPGEQIWE IRKDQLLYNP 600
  601 LFRMCLSSNG EHPSLVPCDT TDLLQKWIFS QND

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle