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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GALC_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTHNFLCII SVILGCSAQF YVIDDRIGLG REFDGIGGLS GGGATSRLLV NYEEPYRSQI  60
   61 LDYLFKPNFG ASLHILKVEI GGDAQTTDGT EPSHMHSKDE GNFFRGYEWW LMKEAKKRNP 120
  121 NIKLIGLPWA FPGWVGYGTQ WPYFFPNVTA NYVITWVMGA KQHHNLDIDY IGIWNEKAFD 180
  181 PTYIKVLRDA LDRAGFTNIG IIAADGDWSI ASAMLDDPYL NDAVEVIGVH YPGTNTVKEA 240
  241 LLTERKLWSS EDYSTYNDDI GAGCWARILN QNYVNGKMTS TISWNVIASY YENLSFGRDG 300
  301 LMTAEEPWSG HYIVESPIWM TAHTTQFTQP GWFYLQTVGK LNHGGSYVAL TDRKGNLTII 360
  361 IETMTHEHSQ CIRPPLPHFD VSPQIATFEL KGSFAHLADL QVWYSKLDFK SGNGTLFKQL 420
  421 RPIRAHNGLL SLKLDVDEVF TITTVTTAQR GFYPEPPKSC PFPKNYTDDF TIDNPPFSEA 480
  481 PYFADQTGVF EYFRNTTDNS SHAFTLRQVV TERPVAWAKD ADQTISIIGD YSWSDVNVSC 540
  541 DVFIETPKTG GVFLAARVDQ GGESVRQAKG VFYWIYANGT YRVTNDIGGK RVLAEGLSGT 600
  601 KAGVWYTLTL SVKGYFATGS LNGFPLWKNA AVLEPKSGWA ALGTLSFEYA QFDNFNVIAG 660
  661 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle