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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76781063, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHLKFVLLL AIAANFWECG DAKFGEKGEL SPRRRRCYDG SLPRRLKKKE RKLSLEGSGG  60
   61 GEVCHRLYPR VSCCPSRRAP YQILHRKDAR TFSTNNTECS RLLEEIKCAH CSPNAQMLFH 120
  121 SPKLEKAPHR EQDLPRLCHD YCQEFYYTCR GHVPELFQAD VDEFCQYYGR MDGGLCFPDF 180
  181 HRKQLRRDSN YLLDEKTEAI NRKHKHNCYC AQEIHSGLQQ PVGVVHCGDG SQRLFILERE 240
  241 GFVWILTHDM ELLKEPFLDI HKLVQSGLKG GDERGLLSLA FHPNYKKNGK LYVSYTTNQE 300
  301 RWTIGPHDHI LRVVEYTVSR KNPNQVDTRT PRVLMEVAEL HRKHLGGQLL FGPDGLLHIF 360
  361 LGDGMITLDN MEEMDGLSDF TGSVLRVDVD TECCSTPYSI PRNNPYFNST NQPPEIFAHG 420
  421 LHDPGRCAVD KLRMDTNGSL LILCTDTVGK NTTTGRILQV IKGKDYENEP SMFDLGSSGG 480
  481 TTPVGGFIYR GCQSRRLYGS YVFGDKNGNF RILQRPLEDR LWQEKPLCLG TSSSCGSSLV 540
  541 GHILGFGEDE LGEVYILVSS KSTAKQSHGK IYKLVDPKRP QVPKECRRPV EDPEMLSTAC 600
  601 SRECKNGHCT PTGKCCCNAG WEGPFCLRAK CELACRNGGV CVEPNKCLCK EGFSGNQCSK 660
  661 GERGTKGDGE KDSILEHIID MTTYLLDLTS YIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle