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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56270329
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEPGKETAA TSEQKPRPTL RASNTNRQPK VKRRKKDLEE LKKEVVMDDH KLTLDELSAK  60
   61 YSVDLTKGLS VTDAQEILTL NGPNVLTPPP TTPEWIKFCK QLFGGFSLLL WTGSLLCFLA 120
  121 YGIHVSYYQE NANKDNLYLG IVLSAVVIIT GCFSYYQEAK SSKIMESFKT MVPQQALVIR 180
  181 DGEKMQINVR DVVLGDLVEV KGGDQVPADI RVIAAQGCKV DNSSLTGESE PQSRCPDCTH 240
  241 ENPLETRNII FFSTNCVEGT ARGVVIATGD HTVMGRIASL TSGLTMGKTP IATEIEHFIH 300
  301 IITAVAVFLG VTFFFLSLIL GYTWLDAVIF LIGIIVANVP EGLLATVTVC LTLTAKRMAR 360
  361 KNCLVKNLEA VETLGSTSTI CSDKTGTLTQ NRMTVAHLWF DKTVYEADTS EEQTTGKTFP 420
  421 KSSDTWFYLA RIAGLCNRAD FKPHQESLPI TKRTTTGDAS ESALLKFIEQ SYSPVSEMRQ 480
  481 KNPKVAEIPF NSTNKYQMSI HLLEDNSEAH VLLMKGAPER ILDFCSSFLL NGQEYPMDEE 540
  541 MKTDFQNAYI ELGGLGERVL GFCFLNLPSN FSKGFQFNTE ELNFPMENLC FAGLISMIDP 600
  601 PRTAVPDAVS KCRSAGIKVI MVTGDHPITA KAIAKSVGII SEANETAEDI AARLNISISQ 660
  661 VSNKSIKAIV VHGSELKDMD SGQLDNILKS YKEIVFARTS PQQKLIIVEG CQRLGAIVAV 720
  721 TGDGVNDSPA LKKADIGIAM GITGSDVSKQ AADMILLDDN FASIVTGVEE GRLIFDNLKK 780
  781 SIAYTLTSNI PEITPFLLFI VLSIPLPLGT ITILCIDLGT DMVPAISLAY ETPESDIMKR 840
  841 LPRNPKTDNL VNDRLIGMAY GQIGMIQALA GFFTYFVILA ENGFKPLDLL GIRLYWDDTN 900
  901 LNDLEDTYGQ QWTYEQRKVV EFTCQTAFFI SIVIVQWADL IICKTRRNSL FKQGMKNKVL 960
  961 IFGLLEETIL AACLSYIPGM DVALRMYPLK INWWFCALPY SVLIFIYDEV RKLIIRRRPG1020
 1021 GWLEKETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle