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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67810531
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPQSLGLQR GSFFLGKRGP GLMVSLPLLA SSLQVNFRSS RSGQRCWAAR TSVEKRLVVL  60
   61 VTLLAAGLVA CLAALGIQYQ TRTPPVCLTE ACVSVTSSIL NSMDPTVDPC QDFFSYACGG 120
  121 WIKANPVPDG HSRWGTFSNL WEHNQAVIKH LLENATASVS EAERKAQVYY RACMNETRIE 180
  181 ELRAKPLMEL IEKLGGWNIT GPWAKDNFQD TLQVVTAHYR TSPFFSVYVS ADSKNSNSNV 240
  241 IQVDQSGLGL PSRDYYLNKT ENEKVLTGYL NYMVQLGKLL GGGDEDAIRP QMQQILDFET 300
  301 ALANITIPQE KRRDEELIYH KVTAAELQTL APAINWLPFL NTIFYPVEIN ESEPIVVYDK 360
  361 EYLRQVSTLI NNTDKCLLNN YMMWNLVRKT SSFLDQRFQD ADEKFMEVMY GTKKTCIPRW 420
  421 KFCVSDTENN LGFALGPMFV KATFAEDSKN IASEIIMEIK KAFEESLSTL KWMDEETRRS 480
  481 AKEKADAIYN MIGYPNFIMD PKELDKVFND YTAVPDLYFE NAMRFFNFSW RVTADQLRKA 540
  541 PNRDQWSMTP PMVNAYYSPT KNEIVFPAGI LQAPFYTRSS PNALNFGGIG VVVGHELTHA 600
  601 FDDQGREYDK DGNLRPWWKN SSVEAFKQQT ECMVQQYSNY SVNGEPVNGR HTLGENIADN 660
  661 GGLKAAYRAY QNWVKKNGAE QTLPTLGLTS NQLFFLGFAQ VWCSVRTPES SHEGLITDPH 720
  721 SPSRFRVIGS LSNSKEFSEH FRCPPGSPMN PHHKCEVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle