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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|65306610, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKMKTGCAI LVACALVVGT SLGSHWNVQA VAPCRPGFSQ SFYTVFVPRV VLRGLNIHKD  60
   61 TLLSSGHVKF ETCHRIEELS FESSDPKFSV RPDGSLYAEQ DVTNLTEPIQ FMVTARDRAG 120
  121 EYIWETTVKL ALAGHPLSPP FNQIAGEAIY GGPSHYHYHY QNPRLITFPR QRQRGLSNGL 180
  181 RRQKRDWVIP PINVPENSRG PFPQVLVMIR SDQDKKIEIR YSITGAGADQ PPNDVFNIDP 240
  241 VTGKMSVTKP LDREDRASYH LKAHAVDING NQMEPPIDLY IYVIDMNDNR PEFKNQVYNG 300
  301 SVAEGSKPGT SVMQVTAFDA DDSTTANGLV HYRILSQTPH IPIPNMFTIN GATGEISTIA 360
  361 AGIDREKVSQ YTVIVQATDM EGNLNFGLSN TATALISISD INDNPPELDS KTFLGEVPEN 420
  421 AVGVVVANLT VRDKDQPHTP NWNAVYRITG GDPLGHFTIR TDEITNDGRV IVVKPVDYER 480
  481 NGAFMLMVVV SNQAHLASGI PSSPSSSAGV TITVLDVNEA PVFPSNPKII RFEEGVPADT 540
  541 TLATFAALDP DRFIQQTIRY SKLSDPANWL KINRTNGRIT TTAVLDRESP YMKKNVYEAT 600
  601 FLAVDNGSPP ATGTGTLQIY LIDVNDNVPV LVPQEALVCE RSRHGYPVNI TASDLDSEPN 660
  661 AGPYVFELPS YPSSARRNWT ISRLNGNYAQ LKLRIPYLEA GMYRVPILVS DSGNPPLSNT 720
  721 SVLKVKVCPC DENGDCTVIG AVTVAGLGTG AIITILICII ILLSMVLFFV VWVKRREKER 780
  781 QTKPLLIDPE DDVRDNILKY DEEGGGEEDQ DYDLSQLQQP ESLDHIMSKP AGVRRVDERP 840
  841 VILESQYPVR PTVPHPGDIG EFITDGLRAA DNDPTAPPYD SLLVFDYEGS GSTAGSVSSL 900
  901 DSSSSGEQDY DYLNDWGPRF KKLADLYGGG GED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle