YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66910555
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSSVLLCS GCSPWQGFLL TASLLTSWLL PTTAQVTLES SPPQVVEGEN VLLSVDNMPE  60
   61 NIIGFGWFKG ETDMNRGIAL YSLRYTISLM GPVHSGRETL YGNGSLWIKN VTQEDTGFYT 120
  121 FRIINKHGKI QSNTTLFLHV KSSLFVCGHP FNPEQPTIES VPVSVSEWGS VLLRVHHLPN 180
  181 YLRTLFWYRG ALVLNKLEIV RYRTFKDSYE LGPAHSGRET MFNTGSLLLQ NVTWKDTGFY 240
  241 TLRTLSTEFN VELIHIYLQV NTSLSSCCDP ITPAPLTIDP VPRHVAEGES VLLYVHNLPE 300
  301 ALQTFSWYKG VYSLKEFKIA EYSIATKSVF PGPAHRGRAT GYTNGSLLLQ DLTEKDSGLY 360
  361 TLVTLDSNAN IETAHVQVTV HKPVTQPILR VTESIVTVQS SVVFTCLSDN TGVSIRWLFK 420
  421 NQNLQVTERM TLSPSNCQLR IHAVRKKDAG QYRCEVFTPI SSKTSLPVSL AVMNE

Type	Start	End	Confidence
Signal Peptide	1	34	0.91
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	475	0.99