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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57770576, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQARTTISK IFNGEPRSYT RFNLTQNMEG DNSHVEMKLS SDMDEEVEAN GVGENQRNGQ  60
   61 YYPSKLNQRS PKTVCGFVVG ILLLFLFGYL IGYMSNKSTG KTEIKTDCPV FSETAPVRPE 120
  121 IAVSLDWSDL RALLKRKLTT ENINSNFKEF SSLSHQAGSS GDEMLANKIM GKFKTLGMNP 180
  181 WTDEHYVKVH DPGASNNRVL FRNNVVGTTE GYLAYSAIKT VQGAALYAHY GRAEDFRRLQ 240
  241 EVSADVSEKV VLVRAGLLSY AEKVANAASL NASAVLIYPD PVNYQIKENT ALFGHVHLGT 300
  301 GDPYTPGFPS FNHTQFPPAQ SSGLPSIPAQ TITTKQASEI MSKLGGRSSP REWSDGMLAD 360
  361 TQYLLGDKDD IITVEVNNVL VQKKIHNVFG VIKGYLDADR YLVIGVQRDA WGPGFARSTV 420
  421 GTSLLVELAR TITDMIKNDG FKPKRSIVFA SWSAGEFGGV GATEWLEGYL NSLNLKMFSY 480
  481 ISLDDLISGS DSFKAAASPL LYDLLESTMK QVSSPTDSTK SLHEQFAGSN WEKSVIEPMG 540
  541 LSHPSYAFQT FSGIPSLSFR FFTNSRFYPF GTFEDTNQNL DLFTSRKTLV LAKAAGEVAG 600
  601 LVTLRLVHDH LLKLNVAKYT TIIRSYVSQI RSKVESRQMS GRLPPTLTMQ WLLSAQGSYD 660
  661 RAASALTSAI RNSDLDDMEQ CRIINNRIMR VEGSLLSPYV SPRQTLFRHI LLGSGSHTLA 720
  721 ALLDHLEAIK GGLESADIDQ FKNQFALATW TIQGCANALA GEVWDLDNQI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle