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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56687158, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAIPSNLCE LLAGQAYFQA YPAAAYEPWR AQLQLGKFAV GQPLLPPEQL PSHVLVVLSG  60
   61 QIRVVYQPVG QVRGISLGRF GAGACLGWAP LLRGCPGEAS SGSEAGAVLA IPAAAFLDML 120
  121 KQLPDLAQAF GSQAAPSEVM SVLQAQSWPS PLTVQEWSAF VQELLPQTRV QLVDTVHSGA 180
  181 NTLLSRDYDW YVSGNNGTSA LGLPIDLEAA IPSPKGSLAL RLLGLPAGTV AQRQTRNHHD 240
  241 AVGTSEEPST AATTDSATVT DSPSPWTSTV PADLSADLYD GSQRSQKFPV ERGNDPVSEA 300
  301 QACLKMIARS LKIPFRRDQV QRVIEEQYRR LKSISLQELA VLLEMQALRS QILQLRLVDL 360
  361 PRVPLPALIA WEEGHAVLYA VDATSITFAD PRQGLITLSL AEFQQRWGNA GTILLATKTQ 420
  421 FTQSQRFGLS WFWPSIQRYR VRLIEVLIAS LVVQLFTLAN PLIIQQVIDK VIGQGSLNNL 480
  481 NSFAVLLVIL GVFQGLLSSL RTYLFADTTN RIDLKLGSDI IDRLLKLPLR YFERRPVGEL 540
  541 SSRVQELEKI RSFLTGTALT TVMDAMFSVI YILVMLVYSW FLTLVALSTV PIFVAITFFA 600
  601 SPVVRRQLRE KAERNAETQS QLVEVLSGIQ TVKAQNIELK ARWQWQERYA RYIAAGFRNI 660
  661 NTSTAASSLT NFFNQLSGLL VLWVGVYLVF DNQLSLGQLI AFRIISGYVT QPLLRLAQLW 720
  721 QNFQETALSL ERLADIVDTP QESDDDDQGK IPMPMINGKV EFRNLSFRFG EQGPLQLSNV 780
  781 TLEIPAGEYV GIVGQSGSGK STLMKLLPRL YSPLEGEILI DGYDISKVGL YSLRRQIGIV 840
  841 PQDSLLFQGT VEENISLTKP NATTDEIITA AKAAGAHDFI MTLPLGYNTR VGERGGALSG 900
  901 GQRQRIAIAR TVLQNPQLLI LDEATSALDY DTERQVSINL QQHFRGKTVF FITHRLSTVR 960
  961 HADRIIVMDK GAMVEQGSHD ELMELRGRYF CLYRQQDALN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle