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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56698543, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFALAERQRQ RRFRNEIPAN SAPESRKVAH FLHIDVRLPK NASAIKGKDR EKHTSTVSPA  60
   61 RAMVRQRQRP GRVGMTDSKR RKSQLVADKR YPTKGKPAAA GAKRKPAPKR KAPAPKRPRR 120
  121 GGPLGWLSRF FGWIFGLIWG FAWRIGMIVA LLVGLAVALV YSTLPDVTAL LDGRARGSVT 180
  181 LLDREGDVFA WRGDQFGGVI TTDTVSPHLK NAVVATEDKR FYYHVGLSPR GIASAVRINL 240
  241 REGRGPLSGH GGSTITQQTA KLLCLGVPFD PEEWKSEAAY EADCRRGSLW RKVKEAVYSL 300
  301 AMEAKYSKDE ILNIYLNRAF LGAGARGFEA ASQRYFGKSS AQVDPAEAAM LAGLLVAPTR 360
  361 YAPTNSLKRS QERARVVVAL MEEQGYLTAA QADGARANPA RLSEAAAAQA GGYFADWVMS 420
  421 ELPDYFGGNT TEDVIIRTTL DQRIQTSAEE AMRFVFQEKV RDGSKAQAAI VVMSADGAVR 480
  481 AMVGGRDTKV TGAFNRATQA ARQTGSSFKP FVYATALELG HSPLDTVVDE PYCINIAGSG 540
  541 QWCPKNYTNK HYGRVTLAQA LKDSLNVPAV KVAEAMGLDN VRRVASDFGI DSDLAAGPAL 600
  601 ALGASESSLI EMTGAYAGIL NGGSSVEPYG LTELHLQGEN EVLMATGTGI GERVINKDAA 660
  661 AQLIWMMEKV ISEGSGRRAA LPGRPAAGKT GTTQAARDAW FIGFTADYVT GVWMGYDDNT 720
  721 PLKGVTGGGL PAEIWHETMI RVHEGTPVNP LPMQAPRQPK PIAQPKPQQP KGGLGQAVDQ 780
  781 LLRDLFGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle