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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56697652, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKECSMKL KTLLMGAIAS AALAPAAFAE RGSDGNVSII YWQAPSILNP FLSGGTKDVE  60
   61 SASLVIEPLA RYDENGGMVP FLATEIPTVE NGGVSADLTS ITWKIAPGIK WSDGSAFTAH 120
  121 DVKFTADYCM HPEGGCAQLT KFEGVTSVEA LDDMTVKVTF DKPTPFPYGP FVGGESPIIQ 180
  181 KAQFENCMGA KAPECTTENF GPIGTGPFVV TEFKPNDVIT MKANDNYRDP AKPAFATLTF 240
  241 KGGGDATAAG RAVMETGEFD YAWNLQLAPE VIQQMQAGGK GTPVAGFGPL VERIMLNQTN 300
  301 PSPALPEGER STAKHPHPFL QDPAVYKAMS MAIDRPLLVE IGYGQAGKVT CNWVPAPAAV 360
  361 NSDTFTCDTQ DIEGAKKLLD DAGIVDTNGD GVREKDGVPL KVVYQTSTNA VRQDFQALIK 420
  421 EWWAEIGIES ELRNINASVF FGGDPGSPDT FQKFYADVEM YANTFNGTDP QSYLANGLCD 480
  481 KAPKPESQWQ GENISRFCNE EYDALHAELT KTAGAEARAE IAKRLNDIMV ENGGMIPLVH 540
  541 RGRLSAHSNT LGGVVLNVWD SELWNAADWY RIK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle