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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56697287, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASLPDKAR VVIIGGGIMG CSVAYHLAKS GWSDVVLLER KTLTSGTTWH AAGLVGQLQG  60
   61 SHATTAFASY GVELLQEIER ETGQNPGFRQ SGSISIAVNE ERLAELKRKA DFARLFGVEA 120
  121 HYMQTAEIAE RWPLMNAEGV LGGIHMPSDG SANPVDLTQA LARGARKYGA TIRENVKVEK 180
  181 VLTANGRVTG VRSDHGTIMA DFVVNCGGMW ARDLGRQNGV GVPLHACEHY YLVTEPILDL 240
  241 PADLPVLRSY CDGTYWKEDA GKLLFGFAHF HAKAWATGGI PDSFEFDSLP FVEDDVIEVL 300
  301 DLAMNRVPIL QETGIRTFFN GPESYSHDGR FTLGEAPDLK GYFVLAGVNS TGIQSGSGAG 360
  361 RAVADWIMTG HPPMDLSEMD PARIEEWQAR DPYLRDRCPE TLVLTYAMHW PGRQRQSARG 420
  421 LRRTPFYHVM KAHGAAYGEV QGWERPGWFA PGGETPVYDH SFYRPGWFDH AQAEQRAVRG 480
  481 AAGLIDYSML GKLMVEGRDA EAFLQRACTN DMALPVGRVA YTLMLNDHGG IESDVTVARH 540
  541 GPDSFMVMSA ISHTRRDRDH LRNLIRPDED VRLRDATSAY AVLSLCGPKS RQILADVADI 600
  601 DLSDAAFPFN SLARFHIGHA PVFAQRLSYT GDLGWEIFVT PDFAEHVFDV LMASGAPQGL 660
  661 RLVGGEALNA LRIEAGFAHW GHDMAYTEAP HQVGLGFVCK PDKAVPFIGR DACLARKAAG 720
  721 KGPFLCSIRL TEGTPLLHHN EPVLQGGAVV GFVTSGAFSA AAGSAIGLCM VSPPEGGGRR 780
  781 DLETGAYSVL VEGREVPARL SLRALWPLAE DG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle