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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56678129, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGWFGLERMQ GRKPMNKIIM AAVAGLVATA GWHSAALAAG VTEEDLANDT ANTSSVLTNG  60
   61 MGRHLQRYSP LDILNKDNVK NLMPAWAFSL GGEKQRGQET QPLIHDGVMY ITGSYSRMYA 120
  121 IDVNTGEELW QYDARLPEGI LPCCDVINRG GAIYGDKIYF GTLDARIVAL DLKTGDVVWN 180
  181 KKIADYKAGY SYTAAPLIVK GLVITGNSGG EFGIVGEVQA RDAETGEMVW TRPVIEGHMG 240
  241 TFKGEESTMT GTLNATWPGD MWKTGGGATW LGGSYDAETD TLVFGAGNPA PWNSWLRDAG 300
  301 QNNDGKGDNL YAASRIGINP DNGEIKWHFQ TTPREGWDYD GVNEVVAYTD RDGNKRWATA 360
  361 DRNGYFYVLN REDGKFVRGV PFVKDITWAS GLDENGRPIF NEDNRPGDPA AAADGAKGEV 420
  421 IFASPSFLGG KNWMPMAFSQ KTGNFYVPSN EWGMDIWNEP ITYKKGAAYL GAGFTIKPNY 480
  481 EDHIGSLKAI DPDTGELKWE FKNDAPLWGG VMTTAGGLVF TGTPEGKFIA FDDETGEILW 540
  541 SFQTGSGIVG QPVTWEMDGE QYVSVISGWG GAVPLWGGEV AKKVNYLNQG GLLWTFKLPK 600
  601 QLAAAN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle