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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56695637, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQQISSFA AGQWVAPGAG ARTIASAITG APIASAGNDA LDVLAMLDHA RNTGGPALRK  60
   61 LGFHDRARMI KALGQALNAR KAELYAASFD TGATQSDHLI DIDGGIGTMF VFASKGRREM 120
  121 PDGQIYLDGE VEQLSRNGTF LGQHVCTPLQ GVAVHINAFN FPVWGMLEKL APTLLAGVPS 180
  181 IVKPATNSCY VTELAVRIML EAEILPAGAL QLVSGGLGDM LDHLDCQDVV SFTGSADTAL 240
  241 KLRSNPVILQ NSVRFVAEQD SLNASILGPD AEPGTPEFDL FIKEVAREMT TKAGQKCTAI 300
  301 RRIIAPQPRV EAVIEALSAR LSKTVIGDPR DEATRMGALV SGGQKADVLA KAAIIGQEAE 360
  361 QVFTMDPGLS GDLANGAFVP PMLFHCADPD RAQRVHDTEA FGPVSTVMGY RDVDHAVTLA 420
  421 NRGGGSLVTS LITHDADVAR DVVMGAGAFH GRIYINNRDS MKESTGHGSP LPHMVHGGPG 480
  481 RAGGGEEMGG VRGVKHYMQR TAVQGSPEML ARIGGKWVPG ANEVAGPAHP FTRRYNELSI 540
  541 GETLNTAART VTMDDIEHFA HFTGDTFYAH MDDAAAKRNP FFPGRVAHGY LLLSFAAGLF 600
  601 VEPNEGPVLA NTGLDGLRFM KPVSAGDSIK VRLTVKKKTR RTEDYGEVRW HVTLTNQDDE 660
  661 MVAEYELLTM NAY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle