YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56695473, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLELPRRAFA LALTMVLAGV LPLRADTVPT LQESVFWGAE VKSGDLPPID QRIPEEPLIV  60
   61 DLAAKGREFG TPGGVMRTMI TRSKDIRQMV VYGYARLVGY DENYNLVPDL LKSYEVEEDR 120
  121 RFTLHLRKGH KWSDGAPFTS ADFEYWWKDV ANNPLLSPAG PPDFLLIEGQ PPRVSFPDAT 180
  181 TVMFEWDKPN PNFLQSLAQA RPPFIYRPAH FLKQFHQDYA DTAQLAAAVE ENRVKSWAAL 240
  241 HNKLDNMYQF DNAQLPTLQP WINASEGKKI RHNFVRNPYY HRIDTRGVQL PYIDIIEMEI 300
  301 VAPGLVAAKS NAGEVDLQGR GLDFRDASIL KKGEADGGYK TYLWQTGVAS QIAIYPNLNH 360
  361 NDDVWRALLR DARLRRALSL AIDRDAINRA LYFKLAKPGA MAVLPASPFF KQEHRDAWAA 420
  421 YDPARASALL DEVGLDKRDG AGIRLLPDGR PMELVIETAG ERQEVENALQ IITDTWREIG 480
  481 VKLVMRPLDR DILRNRVFAG TTMASVWFGW DNGLPQAYTS PAYLAPTDQV FLAWPKWGQH 540
  541 YQTAGQVGEA PDLPEAQRLM ELLHDWERAN NDQDRAAAWS EMLAIHADQI YGIGILAEAP 600
  601 QPIVVSARMR NVPKKGMWAW DPGAHFGVHR MDEFFIQD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle