YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56677191, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERIETDLLV IGAGSGGLSV AAGASQMGAR VVLLEGHEMG GDCLNYGCVP SKALIASAKA  60
   61 AHARMTDAGL GVAGQEPQVD FAAVKDHVAA VIAQIAPVDS QDRFEGLGVR VIREYGQFVS 120
  121 RTEVQAGAHL IAARRIVIAT GSTPLIPPIP GLDSVPYLTN EILFDLRQRP DHLLIIGGGP 180
  181 IGLEMAQAHV RLGCKVTVIE AARALNREDP EAAALVLTRL RAEGVEIAED TAAAQIRGRA 240
  241 GAIEVVSAEG RIFAGSHLLV AVGRKASTDR LNLDAAGVET TRTGIRVDAS LRTSNRRVYA 300
  301 IGDVAGGLQF THVAGYQAGV ILRSALFGLP SKARTDHIPR ATYTDPELAQ IGLTEAEARD 360
  361 RHGDRVEVAR FDYLHNDRAI AEGRTEGFIK VMVVRGRPVG VTIVGHQAGE HANLWSLALA 420
  421 NNLKMSQVAA MVSPYPTIGE ISKRAAGAYF SPRLFENQSV KRVVGLVQRW LP

Type	Start	End	Confidence
Signal Peptide	1	23	0.66
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	472	0.98