YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56676786, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFQVIAVFL LALIPVLGAV PAQAEPLAKE LFGAQKSASR QKPAAYGSYA KGCAAGLEQL  60
   61 PETGPTWQAM RLSRNRNWGH PETIDFIRDL SGFAARQKGW SGLYIGDISQ PRGGPMLTGH 120
  121 RSHQLGLDID IWMLQANNLR LSGQHRENIS SISLRRAKGA YVNDNWTRQH HAIMREAARD 180
  181 KRVARIFVFP GAKVWMCNNE KGDRSYLRKI RPWWGHHYHF HVRLSCPRGS RGCVDQTPPP 240
  241 QGDGCAEAQE WVNNILNPPP PKPRDPNAPP PKKRREYVLA DLPKQCASVL RSQ

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	293	0.99