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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0297935, CG7...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSLKTADLP ENPREHCNFI SAACFWYTMP TFIKGRKRTL DTKDLYRALK EHKSETLGNK  60
   61 LCASWELELE KTKGKPNLLR ALLRVFGWYF ALLGLVLFLL ELGLRTLQPI FLLKLIAYYT 120
  121 HGSESIESAY YYAAGVILCS ALNVIIMHPY MLGTMHVGLK MRVGMCSMIY RKALRLSKSA 180
  181 LGDTTAGHVV NLMSNDVGRL DLATIFVHYL WVGPLETLFI TYLMYREIGI AAVFGVAFML 240
  241 LFIPLQAYLG KRTSVLRLRT ALRTDERVRM MNEIISGIQV IKMYAWELPF EHMVAFARKK 300
  301 EINAIRHVSY IRGILLSFII FLTRVSIFLS LVGYVLLGTF LTPEVAFLIT AYYNILRTTM 360
  361 TVFFPQGISQ MAETLVSIKR VQKYMQSDET NVMDMSVDLT EDFQGSNQET VHADGDEERD 420
  421 EAEDKLLGPP IATVNENAKL SEAGISISGL MAKWDVNSPD YSLNGVNLRV QPGTMLGIVG 480
  481 RTGSGKSSLI QAILGELPAE SGEIKVNGSM SYASQEPWLF SGTVRQNILF GQPMDRRRYA 540
  541 KVVKKCALER DFELLPFKDK TIVGERGASL SGGQKARISL ARAVYRETSI YLLDDPLSAV 600
  601 DTHVARHLFE QCMRGYLRER IVILATHQLQ FLQHADQIVI MDKGRVSAVG TYESLRESGL 660
  661 DFASMLADPE RDEQSEERSR SRSGSYTHSH SDQRRNSEQS LLSMADSCMD DLEAEQANNQ 720
  721 ERQEAGQIGL RLYSKYFKAG GGFFAFFVMM GFCVLSQGLA SLGDYFLSYW VTKKGNVAYR 780
  781 ADNNDTTRSE ELEPRLSTWL RDIGLSVDAE MLDTYIFTVI TVLTILVTVA RSFLFFNLAM 840
  841 KASIRLHNSM FRGITRAAMY FFNTNPSGRI LNRFSKDMGQ VDEILPAVMM DVIQIFLALA 900
  901 GIVIVIAVVN PLFLIPTVVL GIIFYQLRTF YLKTSRDVKR MEAITRSPVY SHLAASLTGL 960
  961 STIRAFGAQR VLEAEFDNYQ DMHSSAFYMF ISTSRAFGYW LDCFCVIYIA IITLSFFIFP1020
 1021 PANGGDVGLA ITQAMGMTGM VQWGMRQSAE LENTMTAVER VVEYEDIEPE GALEAPADKK1080
 1081 PPKSWPEQGK IVFDELSLRY TPDPKSENVL KSLSFVIKPK EKVGIVGRTG AGKSSLINAL1140
 1141 FRLSYNDGSV LIDKRDTSEM GLHDLRSKIS IIPQEPVLFS GTMRYNLDPF DEYSDDKLWR1200
 1201 SLEEVKLKEV VADLPSGLQS KITEGGTNFS VGQRQLVCLA RAILRENRIL VMDEATANVD1260
 1261 PQTDGLIQTT IRNKFKECTV LTIAHRLHTI MDSDKVLVMD AGRAVEFGTP YELLTLADSK1320
 1321 VFHGMVKQTG HATYESLLKI AQKAFENRQN HSLSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle