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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|61403190, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEPWLHIS FLLLFCFSLV FSLPTGRNSI CGYKSCPATK PSMLNVHLVP HTHDDVGWLK  60
   61 TVDQYFYGDR NNIQHAGVQY ILDSVIDQLQ KDPARRFIYV ETAFFYRWWR QQNQNTRRIV 120
  121 TQLVNEGRLE FINGGWCMSD EATTHYSAVI DQMTLGLRFL NDTFGECGRP RVAWHIDPFG 180
  181 HAREHASIFA QMGYDGFFFG RLDYQDKDRR MKTKEMEMLW RASESLTPPI ADLFTGVLPN 240
  241 GYNPPEGFCW DQSCDDAPIR DDPDLEDYNV DEIVQKFLNA SHKQADYYKT NHIIMTMGSD 300
  301 FQYENANLWY KNMDKLIKYV NALQAKGSKL NVLYSTPSCY LQELNLANFT WPMKTDDFFP 360
  361 YADDAHDFWT GYFTSRPALK LYERLSNSRL QTCNQLEVLG GPTSTSGPFG EGDSDTMRRA 420
  421 MGVAQHHDAV SGTEKQHVAN DYARRLATGW AHCEVLVSNS LAVLSGSEAP RVFCENLNIS 480
  481 VCPLTESSHK FSMNVYNPLG RTVRWPVRLP VNGSVYNVTD ANGKAVDSEV IPLSKSRKEV 540
  541 RQNRGFAKSE LVFQVEAPPL GYSTYIVSMV QDQPPVSRSK NAVPSSIQNK FLKVTFDSTT 600
  601 GLLSSLTNLE TQQTIRLTQN FFWYNASAGN NKESHQPSGA YIFRPNSSDP FIISKTAEIQ 660
  661 AVSLYNSVQE VTQRFSPWVS QVVRLYEDRR ELELEWTVGP VPVEDGLGKE VITRLDTDIQ 720
  721 SSGYFYTDSN GREVLERRKD YRPTWDLKQT EPIAGNYYPI NSRAYIKDDK RQLTVVTDRS 780
  781 QGASSIYNGS LEIMLHRRLL YDDFRGVGEP LSEPGEFAHG LVARGRLLLT LSPPEAAADL 840
  841 HRPLAQSMVL QPLLSFQDGA PSPGTKLEFS GLQAALPPAV HLLTVSQWDQ DSVLVRLEHQ 900
  901 YQAKESKTHS QPVTVNLQKL FSTLQVLGAS EMSLGANQWK EDMIRLHWNT DALPPTARDP 960
  961 SSWEVTLKPM EIRTFLLRVR LL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle