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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ppk20-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKGDNSVKP TEAAGFGDNE RCLADLLKVH FRSYCEKSTI HCVRYLYDSH LHNLERFVVY  60
   61 PLFISTFNFK LYIIIVFRII WSMLLIISIG LSFFFYLLLS ERFVSQKLQT VVHDPQFPVF 120
  121 LVPFPAVGIC TDNRINWNKL EAAKEQFLPT NASVELVESF TVLVSRMETL RFGSYLSSLA 180
  181 ELEDDNLEAV GFVNLTELAI FMTLQCSDIM VPKSCLWRSS SFNCCEYFVL EKTEFGFCLV 240
  241 FNSEVSPRSK AIKQKEGNNF YPRHNAKAGQ STGLNFDLIL NESFRRPDSQ ANNNVYVSIC 300
  301 QAPDQLNNVV YSITQNTETY VTVRPGLTWT DNTTRSIPPE RRNCLFADEQ GELDANDSAK 360
  361 NFGKPFQLSN CLNRCHESYL IQLCNCSLPI FFLYNHRVPD CNAVSLRCLA RHNDIFSYDK 420
  421 RRDEDALFSA TKLGMTCSCL VDCYLLDYYT STTTLPLSAH KLPKDPHQKL FRVDVHYQVE 480
  481 TTPLYRTSLE FTIIDLIANL GGIFGLCLGA SMVSAFELIY YLTVGLAMHL YDHQYYGVLF 540
  541 KHLKAKWVNL KGYLRNEVGH LAENPAAHKD TNDRKLRHPF NYRKNVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle