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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG31660-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELCIATKSK IETAQSSMPQ SSQCSSSSNC RNYQKKCHQN QTNTQVQSTQ RSNCSSHSDR  60
   61 DHLTNQQKQQ NQRTNSATAA SAAAATLSES TRCNIIISSS SSSSSSTKSS KNIREPSSSS 120
  121 STQLNTLYSL LVLLIVGLAT ATASPSPSPS HAPFGRESRR DALLAYYKRA HLPQSSSSGI 180
  181 SLGHKYHLLH DANGLDFDEL TPTASSVSAL SRAERFRLRK RSATPTTPAT AAGVTSLDVA 240
  241 TAAAAATDAA AKDAGSGKKP EEKCEPKVLE TLPDEPFYDY TDIAEDAARQ FIEFLSGKFP 300
  301 NANTPIAIDE PTRAEVSRRA NGIASYALNE DDNLLAFAIA APSIHTVVVK FRDNVTIPPD 360
  361 QVHNKAYLGS YWRELGAAWN STDGTQEWGA PFRDCNLLTR RWLWPFRISF SEHRIKVVAA 420
  421 AFIAADEDVC NDGLEEVFGR RHGCDRNTTF CLLTENKPAA TRDVYTCLCR ESYYLPNSTL 480
  481 QGFRGDRVEL SEGYDNYSCI PCPGGCTNCD SNGVCLTFQE EEVLNVDACL RLLVAIVLGA 540
  541 CILCCIVLGV IVFRQRKCKA IASGMWTVLE TILLGIVLLY ASVAVHFFPA STERCLLEPW 600
  601 LRELGFITCY GAIILKLYRH LVDFRTRKAH RWVLRDVDLL KYLGTMVFAV ICYMAAFTAS 660
  661 SLDLLESAQL ESLREADTNT CHPLKWELVT QTSEMLILCF GLHLSIASRN ANTQFRERQF 720
  721 LVTALTLEFL VSSSFYFLRF VYLPEMSPSA ILLALFIRSQ LTNSFALGLI FVPKLWYQHK 780
  781 QHPQRYNHDQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle