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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG11155-PB
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRKKREIVI KENIQGRSYL KKICCSYIIL SILVISNALP PVIRVGAIFT EDERESSIES  60
   61 AFKYAIYRIN KEKTLLPNTQ LVYDIEYVPR DDSFRTTKKV CSQLEAGVQA IFGPTDALLA 120
  121 SHVQSICEAY DIPHIEGRID LEYNSKEFSI NLYPSHTLLT LAYRDIMVYL NWTKVAIIYE 180
  181 EDYGLFNLMH SSTETKAEMY IRQASPDSYR QVLRAIRQKE IYKIIVDTNP SHIKSFFRSI 240
  241 LQLQMNDHRY HYMFTTFDLE TYDLEDFRYN SVNITAFRLV DVDSKRYLEV INQMQKLQHN 300
  301 GLDTINGSPY IQTESALMFD SVYAFANGLH FLNLDNHQNF YIKNLSCTSD QTWNDGISLY 360
  361 NQINAAITDG LTGTVQFVEG RRNIFKLDIL KLKQEKIQKV GYWHPDDGVN ISDPTAFYDS 420
  421 NIANITLVVM TREERPYVMV KEDKNLTGNL RFEGFCIDLL KAIATQVGFQ YKIELVPDNM 480
  481 YGVYIPETNS WNGIVQELME RRADLAVASM TINYARESVI DFTKPFMNLG IGILFKVPTS 540
  541 QPTRLFSFMN PLAIEIWLYV LAAYILVSFA LFVMARFSPY EWKNPHPCYK ETDIVENQFS 600
  601 ISNSFWFITG TFLRQGSGLN PKISDRAQTK FFSFIAPFAV EIWFYIAFGY IFVSVSIWIV 660
  661 ARLSPIEWVI SKPPCSMACD HMLREIQKEN YFDERLELIS KQKISENEVY LSTDHKIKKS 720
  721 NNCVEHDTTC GHGTLPLHLP NDVNDGASDD NTVDLVRIQN NFTLKNSFWF AIGALMQQGS 780
  781 DLYPRATSTR IVGGCWFFFC LIIISSYTAN LAAFLTVERM ISPIESASDL AEQTEISYGT 840
  841 LEGGSTMTFF RHNKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle