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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Eph-PD
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMVGCHPND KKVKYDGIKS KTSSVTILTS VLNDAISALK SAFYKNQAPI SEQNRSQIVS  60
   61 RMSLLRTILL IIISIHFKLA HADQVVLLDT TREATLEWTR YPYGPQAQTP GWVEESFTDF 120
  121 VKGINWRSYV VCDVAYHNVN NWLWSPFIDR GSANRLYIEI QFTIRDCSLF PGNALSCKET 180
  181 FSLLFYEFDA ATREPPPWQT DSYRLIARIA AGEGRFNQNS DVDINTEVKS IAVNKKGVYF 240
  241 AFRDQGACIS VLAVKVYYIT CPAVTENFAH FNETPTGREI TIIEKQNGTC VDNAEPYETP 300
  301 TYLCKGDGKW TILTGGCRCK AGYEPNYTNK TCTECPLGTF KSPEVTKCTP CPPNSNASKT 360
  361 GSPFCKCASG FYRHPNDGRH MPCYSPPAAP TNLTLLFVDQ TSAIISWSAP AKNESFSSET 420
  421 NSKIYHSDIV YKIKCNICSP NVVYNPSTDT FNETKITLTN LEPVTTYTVQ IHAINSVSHI 480
  481 NEFKRHSNES SLVAVSDIVF SNTSLLNIPL DLNEVKTGQA EIVFTTESVL LSTVFNLRIL 540
  541 AITNKDADLE WDKPVQSDFP LEFYEVRWFP KVELDAINKS ALNTKETKAH IVGLLENTEY 600
  601 GFQVRCKTNN GFGSYSNMIY AQTLQSVGSV YDDSVQIRFI AGAIVTGVLF LVIFIIATVY 660
  661 FMRSKHQDDL DKKSTNHLPL PLDYASNEVN SMDTTPIVKK LHLNVTTPLF GNSRSYVDPH 720
  721 TYEDPNQAIR EFAREIDANY ITIEAIIGGG EFGDVCRGRL KIPPNFVQDI DVAIKTLKPG 780
  781 SSEKARCDFL TEASIMGQFD HPNVIYLQGV VTRSNPVMII TEYMENGSLD TFLRVNDGKF 840
  841 QTLQLIVMLR GIASGMSYLS DMNYVHRDLA ARNVLVNAQL ICKIADFGLS REIENASDAY 900
  901 TTRGGKIPVR WTAPEAIAFR KFTSASDVWS YGVVLWEVMS YGERPYWNWS NQDVIKSIEK 960
  961 GYRLPAPMDC PEALYQLMLD CWQKQRTHRP TFASIVSTLD NLARQPQSLL TTRPSPESDG1020
 1021 NHILDGQRGQ NIFISTDLWL EHIKMSRYCH HFKEANLINA QQVNSSNYHF CINQFFIVKY1080
 1081 

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